Analysis of Ligand-Protein Contacts in PDB entry:
5FDQ


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 17 ligands in PDB entry 5FDQ. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
C
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
C
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
NAG
D
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
NAG
D
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
MAN
D
3 11ALPHA-D-MANNOPYRANOSE
lig 6
NAG
E
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 7
NAG
E
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
COH
A
701 43PROTOPORPHYRIN IX CONTAINING CO
lig 9
AKR
A
702 5ACRYLIC ACID
lig 10
60A
A
703 102-[(2~{R})-2-(HYDROXYMETHYLOXY)PROPOXY]ETH
lig 11
BOG
A
704 20OCTYL BETA-D-GLUCOPYRANOSIDE
lig 12
NAG
A
710 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 13
COH
B
701 43PROTOPORPHYRIN IX CONTAINING CO
lig 14
AKR
B
702 5ACRYLIC ACID
lig 15
60A
B
703 102-[(2~{R})-2-(HYDROXYMETHYLOXY)PROPOXY]ETH
lig 16
NAG
B
704 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 17
NAG
B
707 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE