Analysis of Ligand-Protein Contacts in PDB entry:
5FRA


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 11 ligands in PDB entry 5FRA. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
GAL
G
1 12BETA-D-GALACTOPYRANOSE
lig 2
SIA
G
2 20N-ACETYL-ALPHA-NEURAMINIC ACID
lig 3
GAL
H
1 12BETA-D-GALACTOPYRANOSE
lig 4
SIA
H
2 20N-ACETYL-ALPHA-NEURAMINIC ACID
lig 5
GAL
I
1 12BETA-D-GALACTOPYRANOSE
lig 6
SIA
I
2 20N-ACETYL-ALPHA-NEURAMINIC ACID
lig 7
ACT
A
1190 4ACETATE ION
lig 8
ACT
B
1190 4ACETATE ION
lig 9
SIA
D
201 21N-ACETYL-ALPHA-NEURAMINIC ACID
lig 10
SIA
E
201 21N-ACETYL-ALPHA-NEURAMINIC ACID
lig 11
SIA
F
201 21N-ACETYL-ALPHA-NEURAMINIC ACID