Analysis of Ligand-Protein Contacts in PDB entry:
5FRE


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 17 ligands in PDB entry 5FRE. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
GAL
D
1 12BETA-D-GALACTOPYRANOSE
lig 2
SIA
D
2 20N-ACETYL-ALPHA-NEURAMINIC ACID
lig 3
GAL
E
1 12BETA-D-GALACTOPYRANOSE
lig 4
SIA
E
2 20N-ACETYL-ALPHA-NEURAMINIC ACID
lig 5
GAL
F
1 12BETA-D-GALACTOPYRANOSE
lig 6
SIA
F
2 20N-ACETYL-ALPHA-NEURAMINIC ACID
lig 7
CA
A
210 1CALCIUM ION
lig 8
CA
A
211 1CALCIUM ION
lig 9
CA
A
212 1CALCIUM ION
lig 10
1PG
A
1190 14 ETHANOL
lig 11
CA
B
210 1CALCIUM ION
lig 12
CA
B
213 1CALCIUM ION
lig 13
CA
B
214 1CALCIUM ION
lig 14
1PG
B
1190 14 ETHANOL
lig 15
ACT
B
1191 4ACETATE ION
lig 16
CA
C
210 1CALCIUM ION
lig 17
CA
C
211 1CALCIUM ION