Analysis of Ligand-Protein Contacts in PDB entry:
5FYI


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 28 ligands in PDB entry 5FYI. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NI
A
501 1NICKEL (II) ION
lig 2
PYR
A
1355 6PYRUVIC ACID
lig 3
PYR
A
1356 6PYRUVIC ACID
lig 4
DMS
A
1357 4DIMETHYL SULFOXIDE
lig 5
EDO
A
1358 41,2-ETHANEDIOL
lig 6
EDO
A
1359 41,2-ETHANEDIOL
lig 7
EDO
A
1360 41,2-ETHANEDIOL
lig 8
EDO
A
1361 41,2-ETHANEDIOL
lig 9
EDO
A
1362 41,2-ETHANEDIOL
lig 10
EDO
A
1363 41,2-ETHANEDIOL
lig 11
EDO
A
1364 41,2-ETHANEDIOL
lig 12
EDO
A
1365 41,2-ETHANEDIOL
lig 13
ZN
A
3000 1ZINC ION
lig 14
EDO
A
3001 41,2-ETHANEDIOL
lig 15
NI
B
501 1NICKEL (II) ION
lig 16
ZN
B
502 1ZINC ION
lig 17
PYR
B
1354 6PYRUVIC ACID
lig 18
PYR
B
1355 6PYRUVIC ACID
lig 19
DMS
B
1356 4DIMETHYL SULFOXIDE
lig 20
EDO
B
1357 41,2-ETHANEDIOL
lig 21
EDO
B
1358 41,2-ETHANEDIOL
lig 22
EDO
B
1359 41,2-ETHANEDIOL
lig 23
EDO
B
1360 41,2-ETHANEDIOL
lig 24
EDO
B
1361 41,2-ETHANEDIOL
lig 25
EDO
B
1362 41,2-ETHANEDIOL
lig 26
EDO
B
1363 41,2-ETHANEDIOL
lig 27
EDO
B
1364 41,2-ETHANEDIOL
lig 28
1KA
B
1365 7(2-HYDROXYETHOXY)ACETALDEHYDE