Analysis of Ligand-Protein Contacts in PDB entry:
5GLR


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 12 ligands in PDB entry 5GLR. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
XYP
C
1 10BETA-D-XYLOPYRANOSE
lig 2
XYP
C
2 9BETA-D-XYLOPYRANOSE
lig 3
XYP
C
3 9BETA-D-XYLOPYRANOSE
lig 4
XYP
D
1 10BETA-D-XYLOPYRANOSE
lig 5
XYP
D
2 9BETA-D-XYLOPYRANOSE
lig 6
XYP
D
3 9BETA-D-XYLOPYRANOSE
lig 7
CA
A
401 1CALCIUM ION
lig 8
NA
A
402 1SODIUM ION
lig 9
ARA
A
403 10ALPHA-L-ARABINOPYRANOSE
lig 10
CA
B
401 1CALCIUM ION
lig 11
NA
B
402 1SODIUM ION
lig 12
FUB
B
403 10BETA-L-ARABINOFURANOSE