Analysis of Ligand-Protein Contacts in PDB entry:
5GMZ


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 21 ligands in PDB entry 5GMZ. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
IPA
A
201 4ISOPROPYL ALCOHOL
lig 2
IPA
A
202 4ISOPROPYL ALCOHOL
lig 3
IPA
A
203 4ISOPROPYL ALCOHOL
lig 4
IPA
A
204 4ISOPROPYL ALCOHOL
lig 5
6XU
A
205 34 PYRIMIDIN-6-YL]METHYL]PYRROLIDINE-2-CARBO
lig 6
6XU
A
206 34 PYRIMIDIN-6-YL]METHYL]PYRROLIDINE-2-CARBO
lig 7
GOL
B
201 6GLYCEROL
lig 8
6XU
B
202 34 PYRIMIDIN-6-YL]METHYL]PYRROLIDINE-2-CARBO
lig 9
IPA
C
201 4ISOPROPYL ALCOHOL
lig 10
6XU
C
202 34 PYRIMIDIN-6-YL]METHYL]PYRROLIDINE-2-CARBO
lig 11
IPA
D
201 4ISOPROPYL ALCOHOL
lig 12
IPA
D
202 4ISOPROPYL ALCOHOL
lig 13
CL
D
203 1CHLORIDE ION
lig 14
6XU
D
204 34 PYRIMIDIN-6-YL]METHYL]PYRROLIDINE-2-CARBO
lig 15
IPA
E
201 4ISOPROPYL ALCOHOL
lig 16
IPA
E
202 4ISOPROPYL ALCOHOL
lig 17
IPA
E
203 4ISOPROPYL ALCOHOL
lig 18
IPA
E
204 4ISOPROPYL ALCOHOL
lig 19
6XU
E
205 34 PYRIMIDIN-6-YL]METHYL]PYRROLIDINE-2-CARBO
lig 20
GOL
F
201 6GLYCEROL
lig 21
6XU
F
202 34 PYRIMIDIN-6-YL]METHYL]PYRROLIDINE-2-CARBO