Analysis of Ligand-Protein Contacts in PDB entry:
5GP1


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 15 ligands in PDB entry 5GP1. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
SO4
A
301 5SULFATE ION
lig 2
SO4
A
302 5SULFATE ION
lig 3
SO4
A
303 5SULFATE ION
lig 4
SO4
A
304 5SULFATE ION
lig 5
SO4
A
305 5SULFATE ION
lig 6
GTA
A
306 51P1-7-METHYLGUANOSINE-P3-ADENOSINE-5',5'-TR
lig 7
SAH
A
307 26S-ADENOSYL-L-HOMOCYSTEINE
lig 8
SO4
B
301 5SULFATE ION
lig 9
SO4
B
302 5SULFATE ION
lig 10
GTA
B
303 51P1-7-METHYLGUANOSINE-P3-ADENOSINE-5',5'-TR
lig 11
SAH
B
304 26S-ADENOSYL-L-HOMOCYSTEINE
lig 12
SO4
C
301 5SULFATE ION
lig 13
NI
C
302 1NICKEL (II) ION
lig 14
GTA
C
303 51P1-7-METHYLGUANOSINE-P3-ADENOSINE-5',5'-TR
lig 15
SAH
C
304 26S-ADENOSYL-L-HOMOCYSTEINE