Analysis of Ligand-Protein Contacts in PDB entry:
5HHC


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 124 ligands in PDB entry 5HHC. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
DAR
C
1 11D-ARGININE
lig 2
DAR
C
2 11D-ARGININE
lig 3
DAR
C
3 11D-ARGININE
lig 4
DAR
C
4 11D-ARGININE
lig 5
DAR
C
5 11D-ARGININE
lig 6
DSN
C
8 6D-SERINE
lig 7
DTH
C
9 7D-THREONINE
lig 8
DTY
C
10 12D-TYROSINE
lig 9
DLY
C
11 9D-LYSINE
lig 10
DLE
C
12 8D-LEUCINE
lig 11
DIL
C
13 8D-ISOLEUCINE
lig 12
DLE
C
14 8D-LEUCINE
lig 13
DSG
C
15 8D-ASPARAGINE
lig 14
DLY
C
17 9D-LYSINE
lig 15
DTH
C
18 7D-THREONINE
lig 16
DLE
C
19 8D-LEUCINE
lig 17
DLY
C
20 9D-LYSINE
lig 18
DGL
C
22 9D-GLUTAMIC ACID
lig 19
DTH
C
23 7D-THREONINE
lig 20
DTH
C
24 7D-THREONINE
lig 21
DTH
C
25 7D-THREONINE
lig 22
DGL
C
26 9D-GLUTAMIC ACID
lig 23
DAL
C
27 5D-ALANINE
lig 24
DVA
C
28 7D-VALINE
lig 25
DAS
C
29 8D-ASPARTIC ACID
lig 26
DVA
C
30 7D-VALINE
lig 27
DPN
C
31 11D-PHENYLALANINE
lig 28
DAS
C
32 8D-ASPARTIC ACID
lig 29
DAL
C
33 5D-ALANINE
lig 30
DPN
C
34 11D-PHENYLALANINE
lig 31
DAS
C
35 8D-ASPARTIC ACID
lig 32
DVA
C
36 7D-VALINE
lig 33
DPN
C
37 11D-PHENYLALANINE
lig 34
DPN
C
38 11D-PHENYLALANINE
lig 35
DVA
C
39 7D-VALINE
lig 36
DTY
C
40 12D-TYROSINE
lig 37
DAL
C
41 5D-ALANINE
lig 38
DAL
C
42 5D-ALANINE
lig 39
DSN
C
43 6D-SERINE
lig 40
DSG
C
44 8D-ASPARAGINE
lig 41
DPN
C
45 11D-PHENYLALANINE
lig 42
DSN
C
46 6D-SERINE
lig 43
DAS
C
47 8D-ASPARTIC ACID
lig 44
DPN
C
48 11D-PHENYLALANINE
lig 45
DAS
C
49 8D-ASPARTIC ACID
lig 46
DAS
C
50 8D-ASPARTIC ACID
lig 47
DTR
C
51 14D-TRYPTOPHAN
lig 48
DTH
C
52 7D-THREONINE
lig 49
DTY
C
53 12D-TYROSINE
lig 50
DAS
C
54 8D-ASPARTIC ACID
lig 51
DAS
C
55 8D-ASPARTIC ACID
lig 52
DAL
C
56 5D-ALANINE
lig 53
DTH
C
57 7D-THREONINE
lig 54
DLY
C
58 9D-LYSINE
lig 55
DTH
C
59 7D-THREONINE
lig 56
DPN
C
60 11D-PHENYLALANINE
lig 57
DTH
C
61 7D-THREONINE
lig 58
DVA
C
62 7D-VALINE
lig 59
DTH
C
63 7D-THREONINE
lig 60
DGL
C
64 9D-GLUTAMIC ACID
lig 61
DAR
D
1 11D-ARGININE
lig 62
DAR
D
2 11D-ARGININE
lig 63
DAR
D
3 11D-ARGININE
lig 64
DAR
D
4 11D-ARGININE
lig 65
DAR
D
5 11D-ARGININE
lig 66
DSN
D
8 6D-SERINE
lig 67
DTH
D
9 7D-THREONINE
lig 68
DTY
D
10 12D-TYROSINE
lig 69
DLY
D
11 9D-LYSINE
lig 70
DLE
D
12 8D-LEUCINE
lig 71
DIL
D
13 8D-ISOLEUCINE
lig 72
DLE
D
14 8D-LEUCINE
lig 73
DSG
D
15 8D-ASPARAGINE
lig 74
DLY
D
17 9D-LYSINE
lig 75
DTH
D
18 7D-THREONINE
lig 76
DLE
D
19 8D-LEUCINE
lig 77
DLY
D
20 9D-LYSINE
lig 78
DGL
D
22 9D-GLUTAMIC ACID
lig 79
DTH
D
23 7D-THREONINE
lig 80
DTH
D
24 7D-THREONINE
lig 81
DTH
D
25 7D-THREONINE
lig 82
DGL
D
26 9D-GLUTAMIC ACID
lig 83
DAL
D
27 5D-ALANINE
lig 84
DVA
D
28 7D-VALINE
lig 85
DAS
D
29 8D-ASPARTIC ACID
lig 86
DVA
D
30 7D-VALINE
lig 87
DPN
D
31 11D-PHENYLALANINE
lig 88
DAS
D
32 8D-ASPARTIC ACID
lig 89
DAL
D
33 5D-ALANINE
lig 90
DPN
D
34 11D-PHENYLALANINE
lig 91
DAS
D
35 8D-ASPARTIC ACID
lig 92
DVA
D
36 7D-VALINE
lig 93
DPN
D
37 11D-PHENYLALANINE
lig 94
DPN
D
38 11D-PHENYLALANINE
lig 95
DVA
D
39 7D-VALINE
lig 96
DTY
D
40 12D-TYROSINE
lig 97
DAL
D
41 5D-ALANINE
lig 98
DAL
D
42 5D-ALANINE
lig 99
DSN
D
43 6D-SERINE
lig 100
DSG
D
44 8D-ASPARAGINE
lig 101
DPN
D
45 11D-PHENYLALANINE
lig 102
DSN
D
46 6D-SERINE
lig 103
DAS
D
47 8D-ASPARTIC ACID
lig 104
DPN
D
48 11D-PHENYLALANINE
lig 105
DAS
D
49 8D-ASPARTIC ACID
lig 106
DAS
D
50 8D-ASPARTIC ACID
lig 107
DTR
D
51 14D-TRYPTOPHAN
lig 108
DTH
D
52 7D-THREONINE
lig 109
DTY
D
53 12D-TYROSINE
lig 110
DAS
D
54 8D-ASPARTIC ACID
lig 111
DAS
D
55 8D-ASPARTIC ACID
lig 112
DAL
D
56 5D-ALANINE
lig 113
DTH
D
57 7D-THREONINE
lig 114
DLY
D
58 9D-LYSINE
lig 115
DTH
D
59 7D-THREONINE
lig 116
DPN
D
60 11D-PHENYLALANINE
lig 117
DTH
D
61 7D-THREONINE
lig 118
DVA
D
62 7D-VALINE
lig 119
DTH
D
63 7D-THREONINE
lig 120
DGL
D
64 9D-GLUTAMIC ACID
lig 121
DSN
D
67 6D-SERINE
lig 122
DAS
D
68 8D-ASPARTIC ACID
lig 123
GOL
A
201 6GLYCEROL
lig 124
GOL
B
201 6GLYCEROL