Analysis of Ligand-Protein Contacts in PDB entry:
5HJR


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 62 ligands in PDB entry 5HJR. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
NAG
E
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
E
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
BMA
E
3 11BETA-D-MANNOPYRANOSE
lig 4
MAN
E
4 11ALPHA-D-MANNOPYRANOSE
lig 5
NAG
F
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
NAG
F
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 7
BMA
F
3 11BETA-D-MANNOPYRANOSE
lig 8
MAN
F
4 11ALPHA-D-MANNOPYRANOSE
lig 9
MAN
F
5 11ALPHA-D-MANNOPYRANOSE
lig 10
EDO
A
1005 41,2-ETHANEDIOL
lig 11
EDO
A
1006 41,2-ETHANEDIOL
lig 12
FMT
A
1007 3FORMIC ACID
lig 13
FMT
A
1008 3FORMIC ACID
lig 14
FMT
A
1009 3FORMIC ACID
lig 15
FMT
A
1010 3FORMIC ACID
lig 16
FMT
A
1011 3FORMIC ACID
lig 17
FMT
A
1012 3FORMIC ACID
lig 18
FMT
A
1013 3FORMIC ACID
lig 19
FMT
A
1014 3FORMIC ACID
lig 20
FMT
A
1015 3FORMIC ACID
lig 21
FMT
A
1016 3FORMIC ACID
lig 22
FMT
A
1017 3FORMIC ACID
lig 23
FMT
A
1018 3FORMIC ACID
lig 24
FMT
A
1019 3FORMIC ACID
lig 25
FMT
A
1020 3FORMIC ACID
lig 26
5GF
A
1021 125-FLUORO-BETA-D-GLUCOPYRANOSE
lig 27
FMT
A
1022 3FORMIC ACID
lig 28
P6G
A
1023 11HEXAETHYLENE GLYCOL
lig 29
OXM
A
1024 6OXAMIC ACID
lig 30
TAR
A
1025 10D(-)-TARTARIC ACID
lig 31
EDO
A
1026 41,2-ETHANEDIOL
lig 32
FMT
A
1027 3FORMIC ACID
lig 33
P6G
A
1028 14HEXAETHYLENE GLYCOL
lig 34
FMT
B
201 3FORMIC ACID
lig 35
CA
B
202 1CALCIUM ION
lig 36
CA
B
203 1CALCIUM ION
lig 37
FMT
C
1001 3FORMIC ACID
lig 38
EDO
C
1007 41,2-ETHANEDIOL
lig 39
EDO
C
1008 41,2-ETHANEDIOL
lig 40
EDO
C
1009 41,2-ETHANEDIOL
lig 41
FMT
C
1010 3FORMIC ACID
lig 42
FMT
C
1011 3FORMIC ACID
lig 43
FMT
C
1012 3FORMIC ACID
lig 44
FMT
C
1013 3FORMIC ACID
lig 45
FMT
C
1014 3FORMIC ACID
lig 46
FMT
C
1015 3FORMIC ACID
lig 47
FMT
C
1016 3FORMIC ACID
lig 48
FMT
C
1017 3FORMIC ACID
lig 49
FMT
C
1018 3FORMIC ACID
lig 50
FMT
C
1019 3FORMIC ACID
lig 51
FMT
C
1020 3FORMIC ACID
lig 52
FMT
C
1021 3FORMIC ACID
lig 53
FMT
C
1022 3FORMIC ACID
lig 54
5GF
C
1023 125-FLUORO-BETA-D-GLUCOPYRANOSE
lig 55
P6G
C
1024 14HEXAETHYLENE GLYCOL
lig 56
OXM
C
1025 6OXAMIC ACID
lig 57
EDO
C
1026 41,2-ETHANEDIOL
lig 58
P6G
C
1027 11HEXAETHYLENE GLYCOL
lig 59
OXM
C
1028 6OXAMIC ACID
lig 60
FMT
D
201 3FORMIC ACID
lig 61
CA
D
202 1CALCIUM ION
lig 62
CA
D
203 1CALCIUM ION