Analysis of Ligand-Protein Contacts in PDB entry:
5HP1


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 24 ligands in PDB entry 5HP1. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
OMC
F
2 21O2'-METHYLYCYTIDINE-5'-MONOPHOSPHATE
lig 2
OMC
F
4 21O2'-METHYLYCYTIDINE-5'-MONOPHOSPHATE
lig 3
OMC
E
2 21O2'-METHYLYCYTIDINE-5'-MONOPHOSPHATE
lig 4
OMC
E
4 21O2'-METHYLYCYTIDINE-5'-MONOPHOSPHATE
lig 5
GLC
G
1 11ALPHA-D-GLUCOPYRANOSE
lig 6
FRU
G
2 12BETA-D-FRUCTOFURANOSE
lig 7
GLC
H
1 11ALPHA-D-GLUCOPYRANOSE
lig 8
FRU
H
2 12BETA-D-FRUCTOFURANOSE
lig 9
MG
A
601 1MAGNESIUM ION
lig 10
PPF
A
602 7PHOSPHONOFORMIC ACID
lig 11
MG
A
603 1MAGNESIUM ION
lig 12
MG
A
604 1MAGNESIUM ION
lig 13
MG
A
605 1MAGNESIUM ION
lig 14
SO4
A
606 5SULFATE ION
lig 15
GOL
B
2002 6GLYCEROL
lig 16
GOL
B
2003 6GLYCEROL
lig 17
PPF
C
601 7PHOSPHONOFORMIC ACID
lig 18
MG
C
602 1MAGNESIUM ION
lig 19
MG
C
603 1MAGNESIUM ION
lig 20
MG
C
604 1MAGNESIUM ION
lig 21
SO4
C
605 5SULFATE ION
lig 22
MG
C
606 1MAGNESIUM ION
lig 23
ATM
F
101 223'-AZIDO-3'-DEOXYTHYMIDINE-5'-MONOPHOSPHAT
lig 24
ATM
E
101 223'-AZIDO-3'-DEOXYTHYMIDINE-5'-MONOPHOSPHAT