Analysis of Ligand-Protein Contacts in PDB entry:
5I1O


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 134 ligands in PDB entry 5I1O. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
XCP
A
26 8(1S,2S)-2-AMINOCYCLOPENTANECARBOXYLIC ACID
lig 2
XCP
B
26 8(1S,2S)-2-AMINOCYCLOPENTANECARBOXYLIC ACID
lig 3
XCP
C
26 8(1S,2S)-2-AMINOCYCLOPENTANECARBOXYLIC ACID
lig 4
XCP
D
26 8(1S,2S)-2-AMINOCYCLOPENTANECARBOXYLIC ACID
lig 5
DLE
E
1 8D-LEUCINE
lig 6
DSN
E
2 6D-SERINE
lig 7
DAS
E
3 8D-ASPARTIC ACID
lig 8
DGL
E
4 9D-GLUTAMIC ACID
lig 9
DAS
E
5 8D-ASPARTIC ACID
lig 10
DPN
E
6 11D-PHENYLALANINE
lig 11
DLY
E
7 9D-LYSINE
lig 12
DAL
E
8 5D-ALANINE
lig 13
DVA
E
9 7D-VALINE
lig 14
DPN
E
10 11D-PHENYLALANINE
lig 15
MED
E
12 8D-METHIONINE
lig 16
DTH
E
13 7D-THREONINE
lig 17
DAR
E
14 11D-ARGININE
lig 18
DSN
E
15 6D-SERINE
lig 19
DAL
E
16 5D-ALANINE
lig 20
DPN
E
17 11D-PHENYLALANINE
lig 21
DAL
E
18 5D-ALANINE
lig 22
DSG
E
19 8D-ASPARAGINE
lig 23
DLE
E
20 8D-LEUCINE
lig 24
DPR
E
21 7D-PROLINE
lig 25
DLE
E
22 8D-LEUCINE
lig 26
DTR
E
23 14D-TRYPTOPHAN
lig 27
DLY
E
24 9D-LYSINE
lig 28
DGN
E
25 9D-GLUTAMINE
lig 29
DGN
E
26 9D-GLUTAMINE
lig 30
DHI
E
27 10D-HISTIDINE
lig 31
DLE
E
28 8D-LEUCINE
lig 32
DLY
E
29 9D-LYSINE
lig 33
DLY
E
30 9D-LYSINE
lig 34
DGL
E
31 9D-GLUTAMIC ACID
lig 35
DLY
E
32 9D-LYSINE
lig 36
DLE
E
34 8D-LEUCINE
lig 37
DPN
E
35 12D-PHENYLALANINE
lig 38
DLE
F
1 8D-LEUCINE
lig 39
DSN
F
2 6D-SERINE
lig 40
DAS
F
3 8D-ASPARTIC ACID
lig 41
DGL
F
4 9D-GLUTAMIC ACID
lig 42
DAS
F
5 8D-ASPARTIC ACID
lig 43
DPN
F
6 11D-PHENYLALANINE
lig 44
DLY
F
7 9D-LYSINE
lig 45
DAL
F
8 5D-ALANINE
lig 46
DVA
F
9 7D-VALINE
lig 47
DPN
F
10 11D-PHENYLALANINE
lig 48
MED
F
12 8D-METHIONINE
lig 49
DTH
F
13 7D-THREONINE
lig 50
DAR
F
14 11D-ARGININE
lig 51
DSN
F
15 6D-SERINE
lig 52
DAL
F
16 5D-ALANINE
lig 53
DPN
F
17 11D-PHENYLALANINE
lig 54
DAL
F
18 5D-ALANINE
lig 55
DSG
F
19 8D-ASPARAGINE
lig 56
DLE
F
20 8D-LEUCINE
lig 57
DPR
F
21 7D-PROLINE
lig 58
DLE
F
22 8D-LEUCINE
lig 59
DTR
F
23 14D-TRYPTOPHAN
lig 60
DLY
F
24 9D-LYSINE
lig 61
DGN
F
25 9D-GLUTAMINE
lig 62
DGN
F
26 9D-GLUTAMINE
lig 63
DHI
F
27 10D-HISTIDINE
lig 64
DLE
F
28 8D-LEUCINE
lig 65
DLY
F
29 9D-LYSINE
lig 66
DLY
F
30 9D-LYSINE
lig 67
DGL
F
31 9D-GLUTAMIC ACID
lig 68
DLY
F
32 9D-LYSINE
lig 69
DLE
F
34 8D-LEUCINE
lig 70
DLE
G
1 8D-LEUCINE
lig 71
DSN
G
2 6D-SERINE
lig 72
DAS
G
3 8D-ASPARTIC ACID
lig 73
DGL
G
4 9D-GLUTAMIC ACID
lig 74
DAS
G
5 8D-ASPARTIC ACID
lig 75
DPN
G
6 11D-PHENYLALANINE
lig 76
DLY
G
7 9D-LYSINE
lig 77
DAL
G
8 5D-ALANINE
lig 78
DVA
G
9 7D-VALINE
lig 79
DPN
G
10 11D-PHENYLALANINE
lig 80
MED
G
12 8D-METHIONINE
lig 81
DTH
G
13 7D-THREONINE
lig 82
DAR
G
14 11D-ARGININE
lig 83
DSN
G
15 6D-SERINE
lig 84
DAL
G
16 5D-ALANINE
lig 85
DPN
G
17 11D-PHENYLALANINE
lig 86
DAL
G
18 5D-ALANINE
lig 87
DSG
G
19 8D-ASPARAGINE
lig 88
DLE
G
20 8D-LEUCINE
lig 89
DPR
G
21 7D-PROLINE
lig 90
DLE
G
22 8D-LEUCINE
lig 91
DTR
G
23 14D-TRYPTOPHAN
lig 92
DLY
G
24 9D-LYSINE
lig 93
DGN
G
25 9D-GLUTAMINE
lig 94
DGN
G
26 9D-GLUTAMINE
lig 95
DHI
G
27 10D-HISTIDINE
lig 96
DLE
G
28 8D-LEUCINE
lig 97
DLY
G
29 9D-LYSINE
lig 98
DLY
G
30 9D-LYSINE
lig 99
DGL
G
31 9D-GLUTAMIC ACID
lig 100
DLY
G
32 9D-LYSINE
lig 101
DLE
G
34 8D-LEUCINE
lig 102
DLE
H
1 8D-LEUCINE
lig 103
DSN
H
2 6D-SERINE
lig 104
DAS
H
3 8D-ASPARTIC ACID
lig 105
DGL
H
4 9D-GLUTAMIC ACID
lig 106
DAS
H
5 8D-ASPARTIC ACID
lig 107
DPN
H
6 11D-PHENYLALANINE
lig 108
DLY
H
7 9D-LYSINE
lig 109
DAL
H
8 5D-ALANINE
lig 110
DVA
H
9 7D-VALINE
lig 111
DPN
H
10 11D-PHENYLALANINE
lig 112
MED
H
12 8D-METHIONINE
lig 113
DTH
H
13 7D-THREONINE
lig 114
DAR
H
14 11D-ARGININE
lig 115
DSN
H
15 6D-SERINE
lig 116
DAL
H
16 5D-ALANINE
lig 117
DPN
H
17 11D-PHENYLALANINE
lig 118
DAL
H
18 5D-ALANINE
lig 119
DSG
H
19 8D-ASPARAGINE
lig 120
DLE
H
20 8D-LEUCINE
lig 121
DPR
H
21 7D-PROLINE
lig 122
DLE
H
22 8D-LEUCINE
lig 123
DTR
H
23 14D-TRYPTOPHAN
lig 124
DLY
H
24 9D-LYSINE
lig 125
DGN
H
25 9D-GLUTAMINE
lig 126
DGN
H
26 9D-GLUTAMINE
lig 127
DHI
H
27 10D-HISTIDINE
lig 128
DLE
H
28 8D-LEUCINE
lig 129
DLY
H
29 9D-LYSINE
lig 130
DLY
H
30 9D-LYSINE
lig 131
DGL
H
31 9D-GLUTAMIC ACID
lig 132
DLY
H
32 9D-LYSINE
lig 133
DLE
H
34 8D-LEUCINE
lig 134
DPN
H
35 11D-PHENYLALANINE