Analysis of Ligand-Protein Contacts in PDB entry:
5IFT


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 32 ligands in PDB entry 5IFT. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
B
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
B
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
BMA
B
3 11BETA-D-MANNOPYRANOSE
lig 4
MAN
B
4 11ALPHA-D-MANNOPYRANOSE
lig 5
MAN
B
5 11ALPHA-D-MANNOPYRANOSE
lig 6
NAG
C
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 7
NAG
C
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
BMA
C
3 11BETA-D-MANNOPYRANOSE
lig 9
MAN
C
4 11ALPHA-D-MANNOPYRANOSE
lig 10
MAN
C
5 11ALPHA-D-MANNOPYRANOSE
lig 11
MAN
C
6 11ALPHA-D-MANNOPYRANOSE
lig 12
MAN
C
7 11ALPHA-D-MANNOPYRANOSE
lig 13
MAN
C
8 11ALPHA-D-MANNOPYRANOSE
lig 14
NAG
D
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 15
NAG
D
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 16
BMA
D
3 11BETA-D-MANNOPYRANOSE
lig 17
MAN
D
4 11ALPHA-D-MANNOPYRANOSE
lig 18
MAN
D
5 11ALPHA-D-MANNOPYRANOSE
lig 19
MAN
D
6 11ALPHA-D-MANNOPYRANOSE
lig 20
GLC
E
1 12ALPHA-D-GLUCOPYRANOSE
lig 21
GAL
E
2 11BETA-D-GALACTOPYRANOSE
lig 22
NAG
A
1156 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 23
NAG
A
1478 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 24
NAG
A
1522 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 25
NAG
A
1739 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 26
NAG
A
1760 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 27
NAG
A
1777 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 28
SO4
A
2001 5SULFATE ION
lig 29
CL
A
2003 1CHLORIDE ION
lig 30
DMS
A
3004 4DIMETHYL SULFOXIDE
lig 31
DMS
A
3005 4DIMETHYL SULFOXIDE
lig 32
DMS
A
3007 4DIMETHYL SULFOXIDE