Analysis of Ligand-Protein Contacts in PDB entry:
5IIY


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 12 ligands in PDB entry 5IIY. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
GAL
C
1 12BETA-D-GALACTOPYRANOSE
lig 2
SIA
C
2 20N-ACETYL-ALPHA-NEURAMINIC ACID
lig 3
CA
A
501 1CALCIUM ION
lig 4
CA
A
502 1CALCIUM ION
lig 5
CA
A
503 1CALCIUM ION
lig 6
ACT
A
504 4ACETATE ION
lig 7
ACT
A
505 4ACETATE ION
lig 8
CA
B
501 1CALCIUM ION
lig 9
CA
B
502 1CALCIUM ION
lig 10
CA
B
503 1CALCIUM ION
lig 11
CA
B
504 1CALCIUM ION
lig 12
ACT
B
505 4ACETATE ION