Analysis of Ligand-Protein Contacts in PDB entry:
5IQF


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 16 ligands in PDB entry 5IQF. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
GDP
A
500 28GUANOSINE-5'-DIPHOSPHATE
lig 2
MG
A
700 1MAGNESIUM ION
lig 3
MG
A
702 1MAGNESIUM ION
lig 4
CL
A
802 1CHLORIDE ION
lig 5
GDP
B
500 28GUANOSINE-5'-DIPHOSPHATE
lig 6
MG
B
700 1MAGNESIUM ION
lig 7
MG
B
702 1MAGNESIUM ION
lig 8
CL
B
802 1CHLORIDE ION
lig 9
GDP
C
500 28GUANOSINE-5'-DIPHOSPHATE
lig 10
MG
C
700 1MAGNESIUM ION
lig 11
MG
C
702 1MAGNESIUM ION
lig 12
CL
C
802 1CHLORIDE ION
lig 13
GDP
D
500 28GUANOSINE-5'-DIPHOSPHATE
lig 14
MG
D
700 1MAGNESIUM ION
lig 15
MG
D
702 1MAGNESIUM ION
lig 16
GOL
D
807 6GLYCEROL