Analysis of Ligand-Protein Contacts in PDB entry:
5IZJ


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

Note, this PDB entry contains modified residue(s) PHOSPHOSERINE (SEP) . This residue is treated as heterogroup (ligand) both in the PDB entry and by LPC/CSU analysis.


There are 43 ligands in PDB entry 5IZJ. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
TPO
A
197 11PHOSPHOTHREONINE
lig 2
SEP
A
338 10PHOSPHOSERINE
lig 3
TPO
B
197 11PHOSPHOTHREONINE
lig 4
SEP
B
338 10PHOSPHOSERINE
lig 5
6J9
G
1 154-(PIPERAZIN-1-YL)-7H-PYRROLO[2,3-D]PYRIMI
lig 6
ZEU
G
2 119-HYDROXYNONANOIC ACID
lig 7
DAR
G
3 11D-ARGININE
lig 8
DAR
G
4 11D-ARGININE
lig 9
NH2
G
5 1AMINO GROUP
lig 10
6J9
F
1 154-(PIPERAZIN-1-YL)-7H-PYRROLO[2,3-D]PYRIMI
lig 11
ZEU
F
2 119-HYDROXYNONANOIC ACID
lig 12
DAR
F
3 11D-ARGININE
lig 13
DAR
F
4 11D-ARGININE
lig 14
DAR
F
5 11D-ARGININE
lig 15
NH2
F
6 1AMINO GROUP
lig 16
PO4
A
401 5PHOSPHATE ION
lig 17
PO4
A
402 5PHOSPHATE ION
lig 18
PO4
A
403 5PHOSPHATE ION
lig 19
PO4
A
404 5PHOSPHATE ION
lig 20
PO4
A
405 5PHOSPHATE ION
lig 21
PO4
A
406 5PHOSPHATE ION
lig 22
PO4
A
407 5PHOSPHATE ION
lig 23
PO4
A
408 5PHOSPHATE ION
lig 24
PO4
A
409 5PHOSPHATE ION
lig 25
PO4
A
410 5PHOSPHATE ION
lig 26
PO4
A
411 5PHOSPHATE ION
lig 27
PO4
A
412 5PHOSPHATE ION
lig 28
PO4
A
413 5PHOSPHATE ION
lig 29
6J9
A
414 154-(PIPERAZIN-1-YL)-7H-PYRROLO[2,3-D]PYRIMI
lig 30
PO4
B
401 5PHOSPHATE ION
lig 31
PO4
B
402 5PHOSPHATE ION
lig 32
PO4
B
403 5PHOSPHATE ION
lig 33
PO4
B
404 5PHOSPHATE ION
lig 34
PO4
B
405 5PHOSPHATE ION
lig 35
PO4
B
406 5PHOSPHATE ION
lig 36
PO4
B
407 5PHOSPHATE ION
lig 37
PO4
B
408 5PHOSPHATE ION
lig 38
PO4
B
409 5PHOSPHATE ION
lig 39
PO4
B
410 5PHOSPHATE ION
lig 40
PO4
B
411 5PHOSPHATE ION
lig 41
PO4
B
412 5PHOSPHATE ION
lig 42
6J9
B
413 154-(PIPERAZIN-1-YL)-7H-PYRROLO[2,3-D]PYRIMI
lig 43
PO4
F
101 5PHOSPHATE ION