Analysis of Ligand-Protein Contacts in PDB entry:
5J5F


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 34 ligands in PDB entry 5J5F. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
PO4
A
301 5PHOSPHATE ION
lig 2
NAG
A
302 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
6GH
A
303 27 PYRIMIDINE-2,4-DIAMINE
lig 4
PO4
B
301 5PHOSPHATE ION
lig 5
PO4
B
302 5PHOSPHATE ION
lig 6
PO4
B
303 5PHOSPHATE ION
lig 7
NAG
B
304 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
6GH
B
305 27 PYRIMIDINE-2,4-DIAMINE
lig 9
PO4
C
301 5PHOSPHATE ION
lig 10
NAG
C
302 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 11
6GH
C
303 27 PYRIMIDINE-2,4-DIAMINE
lig 12
PO4
D
301 5PHOSPHATE ION
lig 13
NAG
D
302 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 14
6GH
D
303 27 PYRIMIDINE-2,4-DIAMINE
lig 15
NAG
E
301 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 16
6GH
E
302 27 PYRIMIDINE-2,4-DIAMINE
lig 17
PO4
F
301 5PHOSPHATE ION
lig 18
PO4
F
302 5PHOSPHATE ION
lig 19
NAG
F
303 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 20
GOL
F
304 6GLYCEROL
lig 21
6GH
F
305 27 PYRIMIDINE-2,4-DIAMINE
lig 22
NAG
G
301 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 23
6GH
G
302 27 PYRIMIDINE-2,4-DIAMINE
lig 24
PO4
H
301 5PHOSPHATE ION
lig 25
NAG
H
302 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 26
GOL
H
303 6GLYCEROL
lig 27
6GH
H
304 27 PYRIMIDINE-2,4-DIAMINE
lig 28
DMS
H
305 4DIMETHYL SULFOXIDE
lig 29
PO4
I
301 5PHOSPHATE ION
lig 30
PO4
I
302 5PHOSPHATE ION
lig 31
NAG
I
303 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 32
6GH
I
304 27 PYRIMIDINE-2,4-DIAMINE
lig 33
NAG
J
301 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 34
6GH
J
302 27 PYRIMIDINE-2,4-DIAMINE