Analysis of Ligand-Protein Contacts in PDB entry:
5J5J


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 34 ligands in PDB entry 5J5J. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
B
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
B
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
BMA
B
3 11BETA-D-MANNOPYRANOSE
lig 4
MAN
B
4 11ALPHA-D-MANNOPYRANOSE
lig 5
NAG
B
5 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
GAL
B
6 11BETA-D-GALACTOPYRANOSE
lig 7
MAN
B
7 11ALPHA-D-MANNOPYRANOSE
lig 8
NAG
B
8 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
NAG
C
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 10
NAG
C
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 11
BMA
C
3 11BETA-D-MANNOPYRANOSE
lig 12
MAN
C
4 11ALPHA-D-MANNOPYRANOSE
lig 13
MAN
C
5 11ALPHA-D-MANNOPYRANOSE
lig 14
FUC
C
6 10ALPHA-L-FUCOPYRANOSE
lig 15
NAG
D
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 16
NAG
D
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 17
MAN
A
609 11ALPHA-D-MANNOPYRANOSE
lig 18
MAN
A
610 11ALPHA-D-MANNOPYRANOSE
lig 19
MAN
A
611 11ALPHA-D-MANNOPYRANOSE
lig 20
NAG
A
620 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 21
NAG
A
621 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 22
CA
A
622 1CALCIUM ION
lig 23
CA
A
623 1CALCIUM ION
lig 24
CA
A
624 1CALCIUM ION
lig 25
CA
A
625 1CALCIUM ION
lig 26
CA
A
626 1CALCIUM ION
lig 27
CA
A
627 1CALCIUM ION
lig 28
CA
A
628 1CALCIUM ION
lig 29
CA
A
629 1CALCIUM ION
lig 30
CA
A
630 1CALCIUM ION
lig 31
CA
A
631 1CALCIUM ION
lig 32
CA
A
632 1CALCIUM ION
lig 33
CL
A
633 1CHLORIDE ION
lig 34
CL
A
634 1CHLORIDE ION