Analysis of Ligand-Protein Contacts in PDB entry:
5JDA


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 18 ligands in PDB entry 5JDA. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
AMP
A
401 23ADENOSINE MONOPHOSPHATE
lig 2
MG
A
402 1MAGNESIUM ION
lig 3
MG
A
403 1MAGNESIUM ION
lig 4
MG
A
404 1MAGNESIUM ION
lig 5
MG
A
405 1MAGNESIUM ION
lig 6
MG
A
406 1MAGNESIUM ION
lig 7
NA
A
407 1SODIUM ION
lig 8
EDO
A
408 41,2-ETHANEDIOL
lig 9
EDO
A
409 41,2-ETHANEDIOL
lig 10
EDO
A
410 41,2-ETHANEDIOL
lig 11
EDO
A
411 41,2-ETHANEDIOL
lig 12
EDO
A
412 41,2-ETHANEDIOL
lig 13
EDO
A
413 41,2-ETHANEDIOL
lig 14
EDO
A
414 41,2-ETHANEDIOL
lig 15
EDO
A
415 41,2-ETHANEDIOL
lig 16
EDO
A
416 41,2-ETHANEDIOL
lig 17
EDO
A
417 41,2-ETHANEDIOL
lig 18
SIN
A
418 8SUCCINIC ACID