Analysis of Ligand-Protein Contacts in PDB entry:
5JDF


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 14 ligands in PDB entry 5JDF. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
CA
A
401 1CALCIUM ION
lig 2
CA
A
402 1CALCIUM ION
lig 3
OLC
A
403 9(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-EN
lig 4
OLC
A
404 25(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-EN
lig 5
OLC
A
405 8(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-EN
lig 6
OLC
A
406 8(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-EN
lig 7
OLC
A
407 15(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-EN
lig 8
MYS
A
408 5PENTADECANE
lig 9
MYS
A
409 5PENTADECANE
lig 10
MYS
A
410 9PENTADECANE
lig 11
MYS
A
411 15PENTADECANE
lig 12
MYS
A
412 8PENTADECANE
lig 13
MYS
A
413 11PENTADECANE
lig 14
1PE
A
414 12PENTAETHYLENE GLYCOL