Analysis of Ligand-Protein Contacts in PDB entry:
5JDH


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 22 ligands in PDB entry 5JDH. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
CL
A
401 1CHLORIDE ION
lig 2
NA
A
402 1SODIUM ION
lig 3
CA
A
403 1CALCIUM ION
lig 4
CA
A
404 1CALCIUM ION
lig 5
MYS
A
405 6PENTADECANE
lig 6
MYS
A
406 6PENTADECANE
lig 7
MYS
A
407 4PENTADECANE
lig 8
MYS
A
408 10PENTADECANE
lig 9
MYS
A
409 4PENTADECANE
lig 10
MYS
A
410 12PENTADECANE
lig 11
MYS
A
411 8PENTADECANE
lig 12
MYS
A
412 5PENTADECANE
lig 13
MYS
A
413 8PENTADECANE
lig 14
MYS
A
414 7PENTADECANE
lig 15
MYS
A
415 4PENTADECANE
lig 16
MYS
A
416 4PENTADECANE
lig 17
1PE
A
417 16PENTAETHYLENE GLYCOL
lig 18
1PE
A
418 5PENTAETHYLENE GLYCOL
lig 19
PE8
A
419 253,6,9,12,15,18,21-HEPTAOXATRICOSANE-1,23-D
lig 20
1PE
A
420 16PENTAETHYLENE GLYCOL
lig 21
PEG
A
421 7DI(HYDROXYETHYL)ETHER
lig 22
OLC
A
422 17(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-EN