Analysis of Ligand-Protein Contacts in PDB entry:
5JDI


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 11 ligands in PDB entry 5JDI. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
CSX
C
168 7S-OXY CYSTEINE
lig 2
NAP
A
301 48NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHO
lig 3
ACT
A
302 4ACETATE ION
lig 4
ACT
A
303 4ACETATE ION
lig 5
6JO
A
304 203,6-DIHYDROXY-2-(3-HYDROXYPHENYL)-4H-1-BEN
lig 6
NAP
B
301 48NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHO
lig 7
6JO
B
302 203,6-DIHYDROXY-2-(3-HYDROXYPHENYL)-4H-1-BEN
lig 8
NAP
C
301 48NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHO
lig 9
ACT
C
302 4ACETATE ION
lig 10
NAP
D
301 48NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHO
lig 11
6JO
D
302 203,6-DIHYDROXY-2-(3-HYDROXYPHENYL)-4H-1-BEN