Analysis of Ligand-Protein Contacts in PDB entry:
5JDM


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 17 ligands in PDB entry 5JDM. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NA
A
401 1SODIUM ION
lig 2
NA
A
402 1SODIUM ION
lig 3
SR
A
403 1STRONTIUM ION
lig 4
OLC
A
404 16(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-EN
lig 5
OLC
A
405 18(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-EN
lig 6
MYS
A
406 11PENTADECANE
lig 7
MYS
A
407 6PENTADECANE
lig 8
MYS
A
408 4PENTADECANE
lig 9
MYS
A
409 10PENTADECANE
lig 10
MYS
A
410 6PENTADECANE
lig 11
MYS
A
411 5PENTADECANE
lig 12
MYS
A
412 11PENTADECANE
lig 13
MYS
A
413 15PENTADECANE
lig 14
MYS
A
414 13PENTADECANE
lig 15
1PE
A
415 16PENTAETHYLENE GLYCOL
lig 16
P3G
A
416 153,6,9,12,15-PENTAOXAHEPTADECANE
lig 17
1PE
A
417 9PENTAETHYLENE GLYCOL