Analysis of Ligand-Protein Contacts in PDB entry:
5JIF


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 38 ligands in PDB entry 5JIF. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
C
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
C
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
NAG
D
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
NAG
D
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
NAG
E
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
NAG
E
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 7
NAG
F
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
NAG
F
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
BMA
F
3 11BETA-D-MANNOPYRANOSE
lig 10
MAN
F
4 11ALPHA-D-MANNOPYRANOSE
lig 11
MAN
F
5 11ALPHA-D-MANNOPYRANOSE
lig 12
MAN
F
6 11ALPHA-D-MANNOPYRANOSE
lig 13
MAN
F
7 11ALPHA-D-MANNOPYRANOSE
lig 14
MAN
F
8 11ALPHA-D-MANNOPYRANOSE
lig 15
NAG
G
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 16
NAG
G
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 17
BMA
G
3 11BETA-D-MANNOPYRANOSE
lig 18
MAN
G
4 11ALPHA-D-MANNOPYRANOSE
lig 19
MAN
G
5 11ALPHA-D-MANNOPYRANOSE
lig 20
NAG
H
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 21
NAG
H
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 22
NAG
I
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 23
NAG
I
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 24
NAG
J
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 25
NAG
J
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 26
NAG
K
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 27
NAG
K
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 28
NAG
L
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 29
NAG
L
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 30
NA
A
801 1SODIUM ION
lig 31
GOL
A
802 6GLYCEROL
lig 32
NAG
A
807 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 33
NAG
A
823 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 34
NAG
A
824 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 35
GOL
A
825 6GLYCEROL
lig 36
NA
B
801 1SODIUM ION
lig 37
NAG
B
802 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 38
NAG
B
807 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE