Analysis of Ligand-Protein Contacts in PDB entry:
5JII


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 19 ligands in PDB entry 5JII. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
C
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
C
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
BMA
C
3 11BETA-D-MANNOPYRANOSE
lig 4
MAN
C
4 11ALPHA-D-MANNOPYRANOSE
lig 5
NAG
C
5 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
MAN
C
6 11ALPHA-D-MANNOPYRANOSE
lig 7
NAG
D
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
NAG
D
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
BMA
D
3 11BETA-D-MANNOPYRANOSE
lig 10
MAN
D
4 11ALPHA-D-MANNOPYRANOSE
lig 11
NAG
D
5 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 12
GAL
D
6 11BETA-D-GALACTOPYRANOSE
lig 13
MAN
D
7 11ALPHA-D-MANNOPYRANOSE
lig 14
FUC
D
8 10ALPHA-L-FUCOPYRANOSE
lig 15
PO4
A
507 5PHOSPHATE ION
lig 16
GOL
A
508 6GLYCEROL
lig 17
GOL
A
509 6GLYCEROL
lig 18
GOL
A
510 6GLYCEROL
lig 19
PO4
B
509 5PHOSPHATE ION