Analysis of Ligand-Protein Contacts in PDB entry:
5JM1


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 15 ligands in PDB entry 5JM1. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
GAL
I
1 12BETA-D-GALACTOPYRANOSE
lig 2
GAL
I
2 11BETA-D-GALACTOPYRANOSE
lig 3
GLA
I
3 11ALPHA-D-GALACTOPYRANOSE
lig 4
EDO
A
201 41,2-ETHANEDIOL
lig 5
EDO
A
202 41,2-ETHANEDIOL
lig 6
EDO
A
203 41,2-ETHANEDIOL
lig 7
EDO
C
201 41,2-ETHANEDIOL
lig 8
PEG
C
202 7DI(HYDROXYETHYL)ETHER
lig 9
EDO
D
101 41,2-ETHANEDIOL
lig 10
EDO
E
201 41,2-ETHANEDIOL
lig 11
EDO
G
201 41,2-ETHANEDIOL
lig 12
EDO
G
202 41,2-ETHANEDIOL
lig 13
EDO
G
203 41,2-ETHANEDIOL
lig 14
EDO
G
204 41,2-ETHANEDIOL
lig 15
AMG
G
205 13METHYL ALPHA-D-GALACTOPYRANOSIDE