Analysis of Ligand-Protein Contacts in PDB entry:
5JOP


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 30 ligands in PDB entry 5JOP. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
A
1 152-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
BGC
A
2 11BETA-D-GLUCOPYRANOSE
lig 3
GAL
A
3 11BETA-D-GALACTOPYRANOSE
lig 4
GAL
A
4 11BETA-D-GALACTOPYRANOSE
lig 5
NAG
B
1 152-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
BGC
B
2 11BETA-D-GLUCOPYRANOSE
lig 7
GAL
B
3 11BETA-D-GALACTOPYRANOSE
lig 8
GAL
B
4 11BETA-D-GALACTOPYRANOSE
lig 9
PO4
D
301 5PHOSPHATE ION
lig 10
GOL
D
302 6GLYCEROL
lig 11
GOL
D
303 6GLYCEROL
lig 12
PO4
E
301 5PHOSPHATE ION
lig 13
GOL
E
302 6GLYCEROL
lig 14
GOL
E
303 6GLYCEROL
lig 15
GOL
E
304 6GLYCEROL
lig 16
GOL
E
305 6GLYCEROL
lig 17
GOL
E
306 6GLYCEROL
lig 18
GOL
E
307 6GLYCEROL
lig 19
GOL
E
308 6GLYCEROL
lig 20
PO4
L
301 5PHOSPHATE ION
lig 21
PO4
L
302 5PHOSPHATE ION
lig 22
PO4
L
303 5PHOSPHATE ION
lig 23
GOL
L
304 6GLYCEROL
lig 24
GOL
L
305 6GLYCEROL
lig 25
GOL
L
306 6GLYCEROL
lig 26
GOL
L
307 6GLYCEROL
lig 27
GOL
L
308 6GLYCEROL
lig 28
GOL
L
309 6GLYCEROL
lig 29
PO4
H
301 5PHOSPHATE ION
lig 30
GOL
H
302 6GLYCEROL