Analysis of Ligand-Protein Contacts in PDB entry:
5JS9


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 72 ligands in PDB entry 5JS9. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
G
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
G
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
NAG
H
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
NAG
H
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
NAG
I
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
NAG
I
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 7
NAG
J
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
NAG
J
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
NAG
K
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 10
NAG
K
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 11
BMA
K
3 11BETA-D-MANNOPYRANOSE
lig 12
MAN
K
4 11ALPHA-D-MANNOPYRANOSE
lig 13
MAN
K
5 11ALPHA-D-MANNOPYRANOSE
lig 14
MAN
K
6 11ALPHA-D-MANNOPYRANOSE
lig 15
MAN
K
7 11ALPHA-D-MANNOPYRANOSE
lig 16
MAN
K
8 11ALPHA-D-MANNOPYRANOSE
lig 17
NAG
L
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 18
NAG
L
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 19
BMA
L
3 11BETA-D-MANNOPYRANOSE
lig 20
MAN
L
4 11ALPHA-D-MANNOPYRANOSE
lig 21
MAN
L
5 11ALPHA-D-MANNOPYRANOSE
lig 22
MAN
L
6 11ALPHA-D-MANNOPYRANOSE
lig 23
MAN
L
7 11ALPHA-D-MANNOPYRANOSE
lig 24
MAN
L
8 11ALPHA-D-MANNOPYRANOSE
lig 25
MAN
L
9 11ALPHA-D-MANNOPYRANOSE
lig 26
MAN
L
10 11ALPHA-D-MANNOPYRANOSE
lig 27
NAG
M
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 28
NAG
M
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 29
BMA
M
3 11BETA-D-MANNOPYRANOSE
lig 30
MAN
M
4 11ALPHA-D-MANNOPYRANOSE
lig 31
MAN
M
5 11ALPHA-D-MANNOPYRANOSE
lig 32
MAN
M
6 11ALPHA-D-MANNOPYRANOSE
lig 33
MAN
M
7 11ALPHA-D-MANNOPYRANOSE
lig 34
MAN
M
8 11ALPHA-D-MANNOPYRANOSE
lig 35
NAG
N
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 36
NAG
N
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 37
BMA
N
3 11BETA-D-MANNOPYRANOSE
lig 38
MAN
N
4 11ALPHA-D-MANNOPYRANOSE
lig 39
MAN
N
5 11ALPHA-D-MANNOPYRANOSE
lig 40
NAG
O
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 41
NAG
O
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 42
BMA
O
3 11BETA-D-MANNOPYRANOSE
lig 43
MAN
O
4 11ALPHA-D-MANNOPYRANOSE
lig 44
MAN
O
5 11ALPHA-D-MANNOPYRANOSE
lig 45
NAG
P
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 46
NAG
P
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 47
BMA
P
3 11BETA-D-MANNOPYRANOSE
lig 48
NAG
Q
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 49
NAG
Q
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 50
BMA
Q
3 11BETA-D-MANNOPYRANOSE
lig 51
NAG
R
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 52
NAG
R
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 53
BMA
R
3 11BETA-D-MANNOPYRANOSE
lig 54
NAG
S
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 55
NAG
S
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 56
BMA
S
3 11BETA-D-MANNOPYRANOSE
lig 57
MAN
S
4 11ALPHA-D-MANNOPYRANOSE
lig 58
MAN
S
5 11ALPHA-D-MANNOPYRANOSE
lig 59
MAN
S
6 11ALPHA-D-MANNOPYRANOSE
lig 60
MAN
S
7 11ALPHA-D-MANNOPYRANOSE
lig 61
MAN
S
8 11ALPHA-D-MANNOPYRANOSE
lig 62
MAN
S
9 11ALPHA-D-MANNOPYRANOSE
lig 63
MAN
S
10 11ALPHA-D-MANNOPYRANOSE
lig 64
MAN
S
11 11ALPHA-D-MANNOPYRANOSE
lig 65
NAG
T
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 66
NAG
T
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 67
BMA
T
3 11BETA-D-MANNOPYRANOSE
lig 68
MAN
T
4 11ALPHA-D-MANNOPYRANOSE
lig 69
NAG
C
603 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 70
NAG
C
606 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 71
NAG
C
619 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 72
NAG
D
705 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE