Analysis of Ligand-Protein Contacts in PDB entry:
5JVY


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 14 ligands in PDB entry 5JVY. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
C
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
C
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
NAG
D
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
NAG
D
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
MAN
D
3 11ALPHA-D-MANNOPYRANOSE
lig 6
COH
A
601 43PROTOPORPHYRIN IX CONTAINING CO
lig 7
BOG
A
602 20OCTYL BETA-D-GLUCOPYRANOSIDE
lig 8
NAG
A
603 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
NAG
A
606 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 10
AKR
A
607 5ACRYLIC ACID
lig 11
COH
B
601 43PROTOPORPHYRIN IX CONTAINING CO
lig 12
NAG
B
602 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 13
NAG
B
606 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 14
AKR
B
607 5ACRYLIC ACID