Analysis of Ligand-Protein Contacts in PDB entry:
5KDS


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 11 ligands in PDB entry 5KDS. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
A2G
B
1 142-ACETAMIDO-2-DEOXY-ALPHA-D-GALACTOPYRANOS
lig 2
NAG
B
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
SIA
B
3 20N-ACETYL-ALPHA-NEURAMINIC ACID
lig 4
ZN
A
1101 1ZINC ION
lig 5
TLA
A
1102 10L(+)-TARTARIC ACID
lig 6
EPE
A
1103 154-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULF
lig 7
EDO
A
1104 41,2-ETHANEDIOL
lig 8
EDO
A
1105 41,2-ETHANEDIOL
lig 9
EDO
A
1106 41,2-ETHANEDIOL
lig 10
EDO
A
1107 41,2-ETHANEDIOL
lig 11
EDO
A
1108 41,2-ETHANEDIOL