Analysis of Ligand-Protein Contacts in PDB entry:
5KDX


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 39 ligands in PDB entry 5KDX. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
A2G
C
1 142-ACETAMIDO-2-DEOXY-ALPHA-D-GALACTOPYRANOS
lig 2
GAL
C
2 11BETA-D-GALACTOPYRANOSE
lig 3
A2G
D
1 142-ACETAMIDO-2-DEOXY-ALPHA-D-GALACTOPYRANOS
lig 4
GAL
D
2 11BETA-D-GALACTOPYRANOSE
lig 5
PO4
A
1003 5PHOSPHATE ION
lig 6
PO4
A
1004 5PHOSPHATE ION
lig 7
ZN
A
1005 1ZINC ION
lig 8
EDO
A
1006 41,2-ETHANEDIOL
lig 9
EDO
A
1007 41,2-ETHANEDIOL
lig 10
EDO
A
1008 41,2-ETHANEDIOL
lig 11
EDO
A
1009 41,2-ETHANEDIOL
lig 12
EDO
A
1010 41,2-ETHANEDIOL
lig 13
EDO
A
1011 41,2-ETHANEDIOL
lig 14
EDO
A
1012 41,2-ETHANEDIOL
lig 15
EDO
A
1013 41,2-ETHANEDIOL
lig 16
EDO
A
1014 41,2-ETHANEDIOL
lig 17
EDO
A
1015 41,2-ETHANEDIOL
lig 18
EDO
A
1016 41,2-ETHANEDIOL
lig 19
EDO
A
1017 41,2-ETHANEDIOL
lig 20
EDO
A
1018 41,2-ETHANEDIOL
lig 21
EDO
A
1019 41,2-ETHANEDIOL
lig 22
EDO
A
1020 41,2-ETHANEDIOL
lig 23
SER
A
1021 7SERINE
lig 24
PO4
B
1003 5PHOSPHATE ION
lig 25
PO4
B
1004 5PHOSPHATE ION
lig 26
PO4
B
1005 5PHOSPHATE ION
lig 27
ZN
B
1006 1ZINC ION
lig 28
EDO
B
1007 41,2-ETHANEDIOL
lig 29
EDO
B
1008 41,2-ETHANEDIOL
lig 30
EDO
B
1009 41,2-ETHANEDIOL
lig 31
EDO
B
1010 41,2-ETHANEDIOL
lig 32
EDO
B
1011 41,2-ETHANEDIOL
lig 33
EDO
B
1012 41,2-ETHANEDIOL
lig 34
EDO
B
1013 41,2-ETHANEDIOL
lig 35
EDO
B
1014 41,2-ETHANEDIOL
lig 36
EDO
B
1015 41,2-ETHANEDIOL
lig 37
EDO
B
1016 41,2-ETHANEDIOL
lig 38
EDO
B
1017 41,2-ETHANEDIOL
lig 39
SER
B
1018 7SERINE