Analysis of Ligand-Protein Contacts in PDB entry:
5KV8


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 24 ligands in PDB entry 5KV8. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NDG
A
601 142-ACETAMIDO-2-DEOXY-ALPHA-D-GLUCOPYRANOSE
lig 2
NDG
A
602 142-ACETAMIDO-2-DEOXY-ALPHA-D-GLUCOPYRANOSE
lig 3
NDG
A
603 142-ACETAMIDO-2-DEOXY-ALPHA-D-GLUCOPYRANOSE
lig 4
BMA
A
604 11BETA-D-MANNOPYRANOSE
lig 5
CA
A
605 1CALCIUM ION
lig 6
6Y6
A
606 29 GLYCERO-D-GALACTO -NON-2-ENONIC ACID
lig 7
EDO
A
607 41,2-ETHANEDIOL
lig 8
EDO
A
608 41,2-ETHANEDIOL
lig 9
EDO
A
609 41,2-ETHANEDIOL
lig 10
NDG
A
610 142-ACETAMIDO-2-DEOXY-ALPHA-D-GLUCOPYRANOSE
lig 11
CIT
A
611 13CITRIC ACID
lig 12
NDG
B
601 142-ACETAMIDO-2-DEOXY-ALPHA-D-GLUCOPYRANOSE
lig 13
NDG
B
602 142-ACETAMIDO-2-DEOXY-ALPHA-D-GLUCOPYRANOSE
lig 14
NDG
B
603 142-ACETAMIDO-2-DEOXY-ALPHA-D-GLUCOPYRANOSE
lig 15
BMA
B
604 11BETA-D-MANNOPYRANOSE
lig 16
CA
B
605 1CALCIUM ION
lig 17
6Y6
B
606 29 GLYCERO-D-GALACTO -NON-2-ENONIC ACID
lig 18
EDO
B
607 41,2-ETHANEDIOL
lig 19
EDO
B
608 41,2-ETHANEDIOL
lig 20
EDO
B
609 41,2-ETHANEDIOL
lig 21
SO4
B
610 5SULFATE ION
lig 22
NDG
B
611 142-ACETAMIDO-2-DEOXY-ALPHA-D-GLUCOPYRANOSE
lig 23
MAN
B
612 11ALPHA-D-MANNOPYRANOSE
lig 24
GOL
B
613 6GLYCEROL