Analysis of Ligand-Protein Contacts in PDB entry:
5KXD


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 30 ligands in PDB entry 5KXD. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
E
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
FUC
E
2 10ALPHA-L-FUCOPYRANOSE
lig 3
NAG
F
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 4
NAG
F
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
BMA
F
3 11BETA-D-MANNOPYRANOSE
lig 6
XYP
F
4 9BETA-D-XYLOPYRANOSE
lig 7
MAN
F
5 11ALPHA-D-MANNOPYRANOSE
lig 8
MAN
F
6 11ALPHA-D-MANNOPYRANOSE
lig 9
FUC
F
7 10ALPHA-L-FUCOPYRANOSE
lig 10
NAG
G
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 11
FUC
G
2 10ALPHA-L-FUCOPYRANOSE
lig 12
CA
A
303 1CALCIUM ION
lig 13
MN
A
304 1MANGANESE (II) ION
lig 14
ACT
A
305 4ACETATE ION
lig 15
6Y2
A
306 38 (HYDROXYMETHYL)-4,5-BIS(OXIDANYL)OXAN-3-Y
lig 16
NAG
B
301 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 17
CA
B
302 1CALCIUM ION
lig 18
MN
B
303 1MANGANESE (II) ION
lig 19
ACT
B
304 4ACETATE ION
lig 20
6Y2
B
305 38 (HYDROXYMETHYL)-4,5-BIS(OXIDANYL)OXAN-3-Y
lig 21
CA
C
308 1CALCIUM ION
lig 22
MN
C
309 1MANGANESE (II) ION
lig 23
ACT
C
310 4ACETATE ION
lig 24
ACT
C
311 4ACETATE ION
lig 25
6Y2
C
312 38 (HYDROXYMETHYL)-4,5-BIS(OXIDANYL)OXAN-3-Y
lig 26
CA
D
303 1CALCIUM ION
lig 27
MN
D
304 1MANGANESE (II) ION
lig 28
ACT
D
305 4ACETATE ION
lig 29
ACT
D
306 4ACETATE ION
lig 30
6Y2
D
307 38 (HYDROXYMETHYL)-4,5-BIS(OXIDANYL)OXAN-3-Y