Analysis of Ligand-Protein Contacts in PDB entry:
5L88


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 17 ligands in PDB entry 5L88. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
A
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
FUC
A
2 10ALPHA-L-FUCOPYRANOSE
lig 3
PG4
H
301 13TETRAETHYLENE GLYCOL
lig 4
PG4
H
302 13TETRAETHYLENE GLYCOL
lig 5
PG4
H
303 13TETRAETHYLENE GLYCOL
lig 6
PE8
H
304 253,6,9,12,15,18,21-HEPTAOXATRICOSANE-1,23-D
lig 7
PGE
H
305 10TRIETHYLENE GLYCOL
lig 8
PEG
H
306 7DI(HYDROXYETHYL)ETHER
lig 9
PEG
H
307 7DI(HYDROXYETHYL)ETHER
lig 10
PG4
H
308 13TETRAETHYLENE GLYCOL
lig 11
PEG
H
309 7DI(HYDROXYETHYL)ETHER
lig 12
K
H
310 1POTASSIUM ION
lig 13
PGE
H
311 10TRIETHYLENE GLYCOL
lig 14
1PE
L
301 16PENTAETHYLENE GLYCOL
lig 15
PGE
L
304 10TRIETHYLENE GLYCOL
lig 16
PGE
L
305 10TRIETHYLENE GLYCOL
lig 17
PGE
L
306 10TRIETHYLENE GLYCOL