Analysis of Ligand-Protein Contacts in PDB entry:
5LDB


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 14 ligands in PDB entry 5LDB. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
ADP
A
1001 27ADENOSINE-5'-DIPHOSPHATE
lig 2
PO4
A
1002 5PHOSPHATE ION
lig 3
MG
A
1003 1MAGNESIUM ION
lig 4
GOL
A
1004 6GLYCEROL
lig 5
ADP
B
1001 27ADENOSINE-5'-DIPHOSPHATE
lig 6
PO4
B
1002 5PHOSPHATE ION
lig 7
MG
B
1003 1MAGNESIUM ION
lig 8
CL
B
1004 1CHLORIDE ION
lig 9
ADP
C
1001 27ADENOSINE-5'-DIPHOSPHATE
lig 10
PO4
C
1002 5PHOSPHATE ION
lig 11
ADP
D
1001 27ADENOSINE-5'-DIPHOSPHATE
lig 12
PO4
D
1002 5PHOSPHATE ION
lig 13
MG
D
1003 1MAGNESIUM ION
lig 14
MG
D
1004 1MAGNESIUM ION