Analysis of Ligand-Protein Contacts in PDB entry:
5LFR


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 26 ligands in PDB entry 5LFR. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
C
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
C
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
BMA
C
3 11BETA-D-MANNOPYRANOSE
lig 4
MAN
C
4 11ALPHA-D-MANNOPYRANOSE
lig 5
MAN
C
5 11ALPHA-D-MANNOPYRANOSE
lig 6
NAG
D
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 7
NAG
D
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
BMA
D
3 11BETA-D-MANNOPYRANOSE
lig 9
MAN
D
4 11ALPHA-D-MANNOPYRANOSE
lig 10
MAN
A
401 11ALPHA-D-MANNOPYRANOSE
lig 11
NAG
A
407 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 12
NAG
A
408 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 13
NAG
A
409 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 14
GOL
A
410 6GLYCEROL
lig 15
GOL
A
411 6GLYCEROL
lig 16
GOL
A
412 6GLYCEROL
lig 17
SO4
A
413 5SULFATE ION
lig 18
SO4
A
414 5SULFATE ION
lig 19
MAN
B
401 11ALPHA-D-MANNOPYRANOSE
lig 20
NAG
B
406 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 21
NAG
B
407 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 22
GOL
B
408 6GLYCEROL
lig 23
SO4
B
409 5SULFATE ION
lig 24
SO4
B
410 5SULFATE ION
lig 25
SO4
B
411 5SULFATE ION
lig 26
SO4
B
412 5SULFATE ION