Analysis of Ligand-Protein Contacts in PDB entry:
5LFV


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 28 ligands in PDB entry 5LFV. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
C
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
C
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
BMA
C
3 11BETA-D-MANNOPYRANOSE
lig 4
MAN
C
4 11ALPHA-D-MANNOPYRANOSE
lig 5
NAG
D
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
NAG
D
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 7
BMA
D
3 11BETA-D-MANNOPYRANOSE
lig 8
MAN
D
4 11ALPHA-D-MANNOPYRANOSE
lig 9
NAG
E
1 22-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 10
GAL
E
2 11BETA-D-GALACTOPYRANOSE
lig 11
SIA
E
3 20N-ACETYL-ALPHA-NEURAMINIC ACID
lig 12
MAN
A
401 11ALPHA-D-MANNOPYRANOSE
lig 13
NAG
A
406 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 14
NAG
A
407 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 15
NAG
A
408 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 16
GOL
A
409 6GLYCEROL
lig 17
SO4
A
410 5SULFATE ION
lig 18
SO4
A
411 5SULFATE ION
lig 19
SO4
A
412 5SULFATE ION
lig 20
SO4
A
413 5SULFATE ION
lig 21
SO4
A
414 5SULFATE ION
lig 22
MAN
B
401 11ALPHA-D-MANNOPYRANOSE
lig 23
NAG
B
406 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 24
NAG
B
407 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 25
SO4
B
408 5SULFATE ION
lig 26
SO4
B
409 5SULFATE ION
lig 27
SO4
B
410 5SULFATE ION
lig 28
SO4
B
411 5SULFATE ION