Analysis of Ligand-Protein Contacts in PDB entry:
5LVP


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

Note, this PDB entry contains modified residue(s) PHOSPHOSERINE (SEP) . This residue is treated as heterogroup (ligand) both in the PDB entry and by LPC/CSU analysis.


There are 14 ligands in PDB entry 5LVP. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
SEP
A
241 10PHOSPHOSERINE
lig 2
SEP
B
241 10PHOSPHOSERINE
lig 3
SEP
C
241 10PHOSPHOSERINE
lig 4
SEP
D
241 10PHOSPHOSERINE
lig 5
SEP
E
12 10PHOSPHOSERINE
lig 6
SEP
F
12 10PHOSPHOSERINE
lig 7
SEP
G
12 10PHOSPHOSERINE
lig 8
SEP
H
12 10PHOSPHOSERINE
lig 9
ATP
A
500 31ADENOSINE-5'-TRIPHOSPHATE
lig 10
ATP
B
401 31ADENOSINE-5'-TRIPHOSPHATE
lig 11
CL
B
402 1CHLORIDE ION
lig 12
ATP
C
401 31ADENOSINE-5'-TRIPHOSPHATE
lig 13
CL
C
402 1CHLORIDE ION
lig 14
ATP
D
500 31ADENOSINE-5'-TRIPHOSPHATE