Analysis of Ligand-Protein Contacts in PDB entry:
5LVX


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 46 ligands in PDB entry 5LVX. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
NAG
E
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
E
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
BMA
E
3 11BETA-D-MANNOPYRANOSE
lig 4
MAN
E
4 11ALPHA-D-MANNOPYRANOSE
lig 5
MAN
E
5 11ALPHA-D-MANNOPYRANOSE
lig 6
MAN
E
6 11ALPHA-D-MANNOPYRANOSE
lig 7
NAG
F
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
NAG
F
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
NAG
G
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 10
NAG
G
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 11
BMA
G
3 11BETA-D-MANNOPYRANOSE
lig 12
MAN
G
4 11ALPHA-D-MANNOPYRANOSE
lig 13
MAN
G
5 11ALPHA-D-MANNOPYRANOSE
lig 14
NAG
H
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 15
NAG
H
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 16
BMA
H
3 11BETA-D-MANNOPYRANOSE
lig 17
MAN
H
4 11ALPHA-D-MANNOPYRANOSE
lig 18
MAN
H
5 11ALPHA-D-MANNOPYRANOSE
lig 19
MAN
H
6 11ALPHA-D-MANNOPYRANOSE
lig 20
79B
A
507 38 3-DIHYDRO-1~{H}-INDEN-5-YL]UNDEC-10-YNOIC
lig 21
PO4
A
508 5PHOSPHATE ION
lig 22
PO4
A
509 5PHOSPHATE ION
lig 23
PO4
A
510 5PHOSPHATE ION
lig 24
PO4
A
511 5PHOSPHATE ION
lig 25
PO4
A
512 5PHOSPHATE ION
lig 26
PO4
A
513 5PHOSPHATE ION
lig 27
NAG
B
503 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 28
7E4
B
504 38 3-DIHYDRO-1~{H}-INDEN-5-YL]UNDEC-10-YNOIC
lig 29
PO4
B
505 5PHOSPHATE ION
lig 30
PO4
B
506 5PHOSPHATE ION
lig 31
PO4
B
507 5PHOSPHATE ION
lig 32
PO4
B
508 5PHOSPHATE ION
lig 33
PO4
B
509 5PHOSPHATE ION
lig 34
7E4
C
506 38 3-DIHYDRO-1~{H}-INDEN-5-YL]UNDEC-10-YNOIC
lig 35
PO4
C
507 5PHOSPHATE ION
lig 36
PO4
C
508 5PHOSPHATE ION
lig 37
PO4
C
509 5PHOSPHATE ION
lig 38
PO4
C
510 5PHOSPHATE ION
lig 39
PO4
C
511 5PHOSPHATE ION
lig 40
NAG
D
507 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 41
79B
D
508 38 3-DIHYDRO-1~{H}-INDEN-5-YL]UNDEC-10-YNOIC
lig 42
PO4
D
509 5PHOSPHATE ION
lig 43
PO4
D
510 5PHOSPHATE ION
lig 44
PO4
D
511 5PHOSPHATE ION
lig 45
PO4
D
512 5PHOSPHATE ION
lig 46
PO4
D
513 5PHOSPHATE ION