Analysis of Ligand-Protein Contacts in PDB entry:
5LXM


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

Note, this PDB entry contains modified residue(s) PHOSPHOTHREONINE (TPO) . This residue is treated as heterogroup (ligand) both in the PDB entry and by LPC/CSU analysis.


There are 14 ligands in PDB entry 5LXM. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
TPO
A
288 11PHOSPHOTHREONINE
lig 2
MK8
D
37 92-METHYL-L-NORLEUCINE
lig 3
MK8
D
41 92-METHYL-L-NORLEUCINE
lig 4
NH2
D
44 1AMINO GROUP
lig 5
ADP
A
501 27ADENOSINE-5'-DIPHOSPHATE
lig 6
PG4
A
502 13TETRAETHYLENE GLYCOL
lig 7
SO4
A
503 5SULFATE ION
lig 8
PEG
A
504 7DI(HYDROXYETHYL)ETHER
lig 9
PEG
A
505 7DI(HYDROXYETHYL)ETHER
lig 10
MES
A
506 122-(N-MORPHOLINO)-ETHANESULFONIC ACID
lig 11
P4G
A
507 111-ETHOXY-2-(2-ETHOXYETHOXY)ETHANE
lig 12
CL
A
508 1CHLORIDE ION
lig 13
MG
A
509 1MAGNESIUM ION
lig 14
MG
A
510 1MAGNESIUM ION