Analysis of Ligand-Protein Contacts in PDB entry:
5LY2


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 30 ligands in PDB entry 5LY2. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
48V
E
0 10{[(2R)-2,3-DIAMINO-3-OXOPROPYL]SULFANYL}AC
lig 2
DTY
E
1 12D-TYROSINE
lig 3
M3L
E
6 12N-TRIMETHYLLYSINE
lig 4
M3L
F
6 12N-TRIMETHYLLYSINE
lig 5
48V
G
0 10{[(2R)-2,3-DIAMINO-3-OXOPROPYL]SULFANYL}AC
lig 6
DTY
G
1 12D-TYROSINE
lig 7
M3L
G
6 12N-TRIMETHYLLYSINE
lig 8
M3L
H
6 12N-TRIMETHYLLYSINE
lig 9
NI
A
501 1NICKEL (II) ION
lig 10
ZN
A
502 1ZINC ION
lig 11
OGA
A
503 10N-OXALYLGLYCINE
lig 12
GOL
A
504 6GLYCEROL
lig 13
GOL
A
505 6GLYCEROL
lig 14
CL
B
401 1CHLORIDE ION
lig 15
NI
B
402 1NICKEL (II) ION
lig 16
ZN
B
403 1ZINC ION
lig 17
CL
B
404 1CHLORIDE ION
lig 18
OGA
B
405 10N-OXALYLGLYCINE
lig 19
GOL
B
406 6GLYCEROL
lig 20
GOL
B
407 6GLYCEROL
lig 21
GOL
B
408 6GLYCEROL
lig 22
NI
C
501 1NICKEL (II) ION
lig 23
ZN
C
502 1ZINC ION
lig 24
CL
C
503 1CHLORIDE ION
lig 25
OGA
C
504 10N-OXALYLGLYCINE
lig 26
CL
D
401 1CHLORIDE ION
lig 27
NI
D
402 1NICKEL (II) ION
lig 28
ZN
D
403 1ZINC ION
lig 29
CL
D
404 1CHLORIDE ION
lig 30
OGA
D
405 10N-OXALYLGLYCINE