Analysis of Ligand-Protein Contacts in PDB entry:
5M3D


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 12 ligands in PDB entry 5M3D. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
EDO
A
301 41,2-ETHANEDIOL
lig 2
EDO
A
302 41,2-ETHANEDIOL
lig 3
PO4
B
301 5PHOSPHATE ION
lig 4
PO4
B
302 5PHOSPHATE ION
lig 5
EDO
B
303 41,2-ETHANEDIOL
lig 6
PO4
C
301 5PHOSPHATE ION
lig 7
PO4
C
302 5PHOSPHATE ION
lig 8
EDO
C
303 41,2-ETHANEDIOL
lig 9
PO4
D
601 5PHOSPHATE ION
lig 10
PO4
D
602 5PHOSPHATE ION
lig 11
EDO
D
603 41,2-ETHANEDIOL
lig 12
EDO
D
604 41,2-ETHANEDIOL