Analysis of Ligand-Protein Contacts in PDB entry:
5M3V


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 21 ligands in PDB entry 5M3V. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
MLY
A
248 11N-DIMETHYL-LYSINE
lig 2
MLZ
A
274 10N-METHYL-LYSINE
lig 3
MLY
B
248 11N-DIMETHYL-LYSINE
lig 4
NAG
C
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
NAG
C
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 6
BMA
C
3 11BETA-D-MANNOPYRANOSE
lig 7
MAN
C
4 11ALPHA-D-MANNOPYRANOSE
lig 8
NAG
C
5 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
GAL
C
6 11BETA-D-GALACTOPYRANOSE
lig 10
MAN
C
7 11ALPHA-D-MANNOPYRANOSE
lig 11
NAG
C
8 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 12
FUL
C
9 10BETA-L-FUCOPYRANOSE
lig 13
NAG
D
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 14
NAG
D
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 15
BMA
D
3 11BETA-D-MANNOPYRANOSE
lig 16
MAN
D
4 11ALPHA-D-MANNOPYRANOSE
lig 17
NAG
D
5 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 18
GAL
D
6 11BETA-D-GALACTOPYRANOSE
lig 19
MAN
D
7 11ALPHA-D-MANNOPYRANOSE
lig 20
NAG
D
8 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 21
FUL
D
9 10BETA-L-FUCOPYRANOSE