Analysis of Ligand-Protein Contacts in PDB entry:
5M8O


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 70 ligands in PDB entry 5M8O. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
E
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
E
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
FUC
E
3 10ALPHA-L-FUCOPYRANOSE
lig 4
NAG
F
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
FUC
F
2 10ALPHA-L-FUCOPYRANOSE
lig 6
NAG
G
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 7
NAG
G
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
NAG
H
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
NAG
H
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 10
NAG
I
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 11
NAG
I
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 12
NAG
J
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 13
NAG
J
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 14
FUC
J
3 10ALPHA-L-FUCOPYRANOSE
lig 15
NAG
K
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 16
FUC
K
2 10ALPHA-L-FUCOPYRANOSE
lig 17
NAG
L
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 18
NAG
L
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 19
NAG
M
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 20
NAG
M
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 21
MAN
M
3 11ALPHA-D-MANNOPYRANOSE
lig 22
MAN
M
4 11ALPHA-D-MANNOPYRANOSE
lig 23
MAN
M
5 11ALPHA-D-MANNOPYRANOSE
lig 24
FUC
M
6 10ALPHA-L-FUCOPYRANOSE
lig 25
NAG
N
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 26
NAG
N
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 27
NAG
O
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 28
NAG
O
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 29
FUC
O
3 10ALPHA-L-FUCOPYRANOSE
lig 30
NAG
P
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 31
NAG
P
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 32
MAN
P
3 11ALPHA-D-MANNOPYRANOSE
lig 33
NAG
Q
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 34
FUC
Q
2 10ALPHA-L-FUCOPYRANOSE
lig 35
NAG
R
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 36
NAG
R
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 37
NAG
S
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 38
NAG
S
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 39
NAG
T
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 40
NAG
T
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 41
MAN
T
3 11ALPHA-D-MANNOPYRANOSE
lig 42
NAG
U
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 43
NAG
U
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 44
FUC
U
3 10ALPHA-L-FUCOPYRANOSE
lig 45
NAG
V
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 46
NAG
V
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 47
MAN
V
3 11ALPHA-D-MANNOPYRANOSE
lig 48
MAN
V
4 11ALPHA-D-MANNOPYRANOSE
lig 49
FUC
V
5 10ALPHA-L-FUCOPYRANOSE
lig 50
NAG
W
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 51
NAG
W
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 52
NAG
X
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 53
NAG
X
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 54
MAN
X
3 11ALPHA-D-MANNOPYRANOSE
lig 55
MAN
X
4 11ALPHA-D-MANNOPYRANOSE
lig 56
MAN
X
5 11ALPHA-D-MANNOPYRANOSE
lig 57
NAG
Y
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 58
NAG
Y
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 59
0TR
A
512 92-HYDROXYCYCLOHEPTA-2,4,6-TRIEN-1-ONE
lig 60
ZN
A
513 1ZINC ION
lig 61
ZN
A
514 1ZINC ION
lig 62
0TR
B
516 92-HYDROXYCYCLOHEPTA-2,4,6-TRIEN-1-ONE
lig 63
ZN
B
517 1ZINC ION
lig 64
ZN
B
518 1ZINC ION
lig 65
0TR
C
516 92-HYDROXYCYCLOHEPTA-2,4,6-TRIEN-1-ONE
lig 66
ZN
C
517 1ZINC ION
lig 67
ZN
C
518 1ZINC ION
lig 68
0TR
D
518 92-HYDROXYCYCLOHEPTA-2,4,6-TRIEN-1-ONE
lig 69
ZN
D
519 1ZINC ION
lig 70
ZN
D
520 1ZINC ION