Analysis of Ligand-Protein Contacts in PDB entry:
5M8T


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 64 ligands in PDB entry 5M8T. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
E
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
E
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
FUC
E
3 10ALPHA-L-FUCOPYRANOSE
lig 4
NAG
F
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 5
FUC
F
2 10ALPHA-L-FUCOPYRANOSE
lig 6
NAG
G
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 7
NAG
G
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 8
NAG
H
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 9
NAG
H
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 10
NAG
I
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 11
NAG
I
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 12
MAN
I
3 11ALPHA-D-MANNOPYRANOSE
lig 13
MAN
I
4 11ALPHA-D-MANNOPYRANOSE
lig 14
FUC
I
5 10ALPHA-L-FUCOPYRANOSE
lig 15
NAG
J
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 16
FUC
J
2 10ALPHA-L-FUCOPYRANOSE
lig 17
NAG
K
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 18
NAG
K
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 19
NAG
L
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 20
NAG
L
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 21
MAN
L
3 11ALPHA-D-MANNOPYRANOSE
lig 22
NAG
M
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 23
NAG
M
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 24
NAG
N
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 25
NAG
N
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 26
FUC
N
3 10ALPHA-L-FUCOPYRANOSE
lig 27
NAG
O
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 28
NAG
O
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 29
MAN
O
3 11ALPHA-D-MANNOPYRANOSE
lig 30
NAG
P
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 31
NAG
P
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 32
NAG
Q
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 33
NAG
Q
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 34
NAG
R
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 35
NAG
R
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 36
NAG
S
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 37
NAG
S
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 38
FUC
S
3 10ALPHA-L-FUCOPYRANOSE
lig 39
NAG
T
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 40
NAG
T
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 41
MAN
T
3 11ALPHA-D-MANNOPYRANOSE
lig 42
FUC
T
4 10ALPHA-L-FUCOPYRANOSE
lig 43
NAG
U
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 44
NAG
U
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 45
NAG
V
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 46
NAG
V
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 47
MAN
V
3 11ALPHA-D-MANNOPYRANOSE
lig 48
FUC
V
4 10ALPHA-L-FUCOPYRANOSE
lig 49
NAG
W
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 50
NAG
W
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 51
NAG
A
508 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 52
ZN
A
511 1ZINC ION
lig 53
ZN
A
512 1ZINC ION
lig 54
0TR
A
513 92-HYDROXYCYCLOHEPTA-2,4,6-TRIEN-1-ONE
lig 55
ZN
B
515 1ZINC ION
lig 56
ZN
B
516 1ZINC ION
lig 57
0TR
B
517 92-HYDROXYCYCLOHEPTA-2,4,6-TRIEN-1-ONE
lig 58
NAG
C
507 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 59
ZN
C
514 1ZINC ION
lig 60
ZN
C
515 1ZINC ION
lig 61
0TR
C
516 92-HYDROXYCYCLOHEPTA-2,4,6-TRIEN-1-ONE
lig 62
ZN
D
516 1ZINC ION
lig 63
ZN
D
517 1ZINC ION
lig 64
0TR
D
518 92-HYDROXYCYCLOHEPTA-2,4,6-TRIEN-1-ONE