Analysis of Ligand-Protein Contacts in PDB entry:
5MAC


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 25 ligands in PDB entry 5MAC. Click on ligand of interest for LPC analysis.


HET
ID
Chain
ID
Residue
N
Number
of atoms
Ligand name
lig 1
KCX
A
193 12LYSINE NZ-CARBOXYLIC ACID
lig 2
KCX
B
193 12LYSINE NZ-CARBOXYLIC ACID
lig 3
KCX
C
193 12LYSINE NZ-CARBOXYLIC ACID
lig 4
KCX
D
193 12LYSINE NZ-CARBOXYLIC ACID
lig 5
KCX
E
193 12LYSINE NZ-CARBOXYLIC ACID
lig 6
CAP
A
501 212-CARBOXYARABINITOL-1,5-DIPHOSPHATE
lig 7
MG
A
502 1MAGNESIUM ION
lig 8
MG
A
503 1MAGNESIUM ION
lig 9
CL
A
504 1CHLORIDE ION
lig 10
CAP
B
501 212-CARBOXYARABINITOL-1,5-DIPHOSPHATE
lig 11
MG
B
502 1MAGNESIUM ION
lig 12
MG
B
503 1MAGNESIUM ION
lig 13
CL
B
504 1CHLORIDE ION
lig 14
CAP
C
501 212-CARBOXYARABINITOL-1,5-DIPHOSPHATE
lig 15
MG
C
502 1MAGNESIUM ION
lig 16
MG
C
503 1MAGNESIUM ION
lig 17
CL
C
504 1CHLORIDE ION
lig 18
CAP
D
501 212-CARBOXYARABINITOL-1,5-DIPHOSPHATE
lig 19
MG
D
502 1MAGNESIUM ION
lig 20
MG
D
503 1MAGNESIUM ION
lig 21
CL
D
504 1CHLORIDE ION
lig 22
CAP
E
501 212-CARBOXYARABINITOL-1,5-DIPHOSPHATE
lig 23
MG
E
502 1MAGNESIUM ION
lig 24
MG
E
503 1MAGNESIUM ION
lig 25
CL
E
504 1CHLORIDE ION