Analysis of Ligand-Protein Contacts in PDB entry:
5MDX

Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 316 ligands in PDB entry 5MDX. Click on ligand of interest for LPC analysis.

	HET ID	Chain ID	Residue N	Number of atoms	Ligand name
lig 1	FE2	A	401	1	FE (II) ION
lig 2	CLA	A	402	45	CHLOROPHYLL A
lig 3	CLA	A	403	45	CHLOROPHYLL A
lig 4	PHO	A	404	44	PHEOPHYTIN A
lig 5	CLA	A	405	45	CHLOROPHYLL A
lig 6	CLA	B	601	45	CHLOROPHYLL A
lig 7	CLA	B	602	45	CHLOROPHYLL A
lig 8	CLA	B	603	45	CHLOROPHYLL A
lig 9	CLA	B	604	45	CHLOROPHYLL A
lig 10	CLA	B	605	45	CHLOROPHYLL A
lig 11	CLA	B	606	45	CHLOROPHYLL A
lig 12	CLA	B	607	45	CHLOROPHYLL A
lig 13	CLA	B	608	45	CHLOROPHYLL A
lig 14	CLA	B	609	45	CHLOROPHYLL A
lig 15	CLA	B	610	45	CHLOROPHYLL A
lig 16	CLA	B	611	45	CHLOROPHYLL A
lig 17	CLA	B	612	45	CHLOROPHYLL A
lig 18	CLA	B	613	45	CHLOROPHYLL A
lig 19	CLA	B	614	45	CHLOROPHYLL A
lig 20	CLA	B	615	45	CHLOROPHYLL A
lig 21	CLA	B	616	45	CHLOROPHYLL A
lig 22	CLA	C	501	45	CHLOROPHYLL A
lig 23	CLA	C	502	45	CHLOROPHYLL A
lig 24	CLA	C	503	45	CHLOROPHYLL A
lig 25	CLA	C	504	45	CHLOROPHYLL A
lig 26	CLA	C	505	45	CHLOROPHYLL A
lig 27	CLA	C	506	45	CHLOROPHYLL A
lig 28	CLA	C	507	45	CHLOROPHYLL A
lig 29	CLA	C	508	45	CHLOROPHYLL A
lig 30	CLA	C	509	45	CHLOROPHYLL A
lig 31	CLA	C	510	45	CHLOROPHYLL A
lig 32	CLA	C	511	45	CHLOROPHYLL A
lig 33	CLA	C	512	45	CHLOROPHYLL A
lig 34	CLA	D	401	45	CHLOROPHYLL A
lig 35	PHO	D	402	44	PHEOPHYTIN A
lig 36	CLA	D	403	45	CHLOROPHYLL A
lig 37	CLA	D	404	45	CHLOROPHYLL A
lig 38	HEM	E	101	43	PROTOPORPHYRIN IX CONTAINING FE
lig 39	FE2	a	401	1	FE (II) ION
lig 40	CLA	a	402	45	CHLOROPHYLL A
lig 41	CLA	a	403	45	CHLOROPHYLL A
lig 42	PHO	a	404	44	PHEOPHYTIN A
lig 43	CLA	a	405	45	CHLOROPHYLL A
lig 44	CLA	b	601	45	CHLOROPHYLL A
lig 45	CLA	b	602	45	CHLOROPHYLL A
lig 46	CLA	b	603	45	CHLOROPHYLL A
lig 47	CLA	b	604	45	CHLOROPHYLL A
lig 48	CLA	b	605	45	CHLOROPHYLL A
lig 49	CLA	b	606	45	CHLOROPHYLL A
lig 50	CLA	b	607	45	CHLOROPHYLL A
lig 51	CLA	b	608	45	CHLOROPHYLL A
lig 52	CLA	b	609	45	CHLOROPHYLL A
lig 53	CLA	b	610	45	CHLOROPHYLL A
lig 54	CLA	b	611	45	CHLOROPHYLL A
lig 55	CLA	b	612	45	CHLOROPHYLL A
lig 56	CLA	b	613	45	CHLOROPHYLL A
lig 57	CLA	b	614	45	CHLOROPHYLL A
lig 58	CLA	b	615	45	CHLOROPHYLL A
lig 59	CLA	b	616	45	CHLOROPHYLL A
lig 60	CLA	d	401	45	CHLOROPHYLL A
lig 61	PHO	d	402	44	PHEOPHYTIN A
lig 62	CLA	d	403	45	CHLOROPHYLL A
lig 63	CLA	d	404	45	CHLOROPHYLL A
lig 64	HEM	e	101	43	PROTOPORPHYRIN IX CONTAINING FE
lig 65	CLA	c	501	45	CHLOROPHYLL A
lig 66	CLA	c	502	45	CHLOROPHYLL A
lig 67	CLA	c	503	45	CHLOROPHYLL A
lig 68	CLA	c	504	45	CHLOROPHYLL A
lig 69	CLA	c	505	45	CHLOROPHYLL A
lig 70	CLA	c	506	45	CHLOROPHYLL A
lig 71	CLA	c	507	45	CHLOROPHYLL A
lig 72	CLA	c	508	45	CHLOROPHYLL A
lig 73	CLA	c	509	45	CHLOROPHYLL A
lig 74	CLA	c	510	45	CHLOROPHYLL A
lig 75	CLA	c	511	45	CHLOROPHYLL A
lig 76	CLA	c	512	45	CHLOROPHYLL A
lig 77	CLA	R	301	45	CHLOROPHYLL A
lig 78	CLA	R	302	45	CHLOROPHYLL A
lig 79	CLA	R	303	45	CHLOROPHYLL A
lig 80	CHL	R	304	46	CHLOROPHYLL B
lig 81	CHL	R	305	46	CHLOROPHYLL B
lig 82	CHL	R	306	46	CHLOROPHYLL B
lig 83	CLA	R	307	45	CHLOROPHYLL A
lig 84	CLA	R	308	45	CHLOROPHYLL A
lig 85	CLA	R	309	45	CHLOROPHYLL A
lig 86	CLA	R	310	45	CHLOROPHYLL A
lig 87	CLA	R	311	45	CHLOROPHYLL A
lig 88	CLA	R	312	45	CHLOROPHYLL A
lig 89	CLA	S	301	45	CHLOROPHYLL A
lig 90	CHL	S	302	46	CHLOROPHYLL B
lig 91	CLA	S	303	45	CHLOROPHYLL A
lig 92	CLA	S	304	45	CHLOROPHYLL A
lig 93	CLA	S	305	45	CHLOROPHYLL A
lig 94	CHL	S	306	46	CHLOROPHYLL B
lig 95	CHL	S	307	46	CHLOROPHYLL B
lig 96	CHL	S	308	46	CHLOROPHYLL B
lig 97	CLA	S	309	45	CHLOROPHYLL A
lig 98	CLA	S	310	45	CHLOROPHYLL A
lig 99	CLA	S	311	45	CHLOROPHYLL A
lig 100	CLA	S	312	45	CHLOROPHYLL A
lig 101	CLA	S	313	45	CHLOROPHYLL A
lig 102	CLA	S	314	45	CHLOROPHYLL A
lig 103	CHL	G	601	46	CHLOROPHYLL B
lig 104	CLA	G	602	45	CHLOROPHYLL A
lig 105	CLA	G	603	45	CHLOROPHYLL A
lig 106	CLA	G	604	45	CHLOROPHYLL A
lig 107	CHL	G	605	42	CHLOROPHYLL B
lig 108	CHL	G	606	46	CHLOROPHYLL B
lig 109	CHL	G	607	46	CHLOROPHYLL B
lig 110	CHL	G	608	46	CHLOROPHYLL B
lig 111	CHL	G	609	46	CHLOROPHYLL B
lig 112	CLA	G	610	45	CHLOROPHYLL A
lig 113	CLA	G	611	45	CHLOROPHYLL A
lig 114	CLA	G	612	45	CHLOROPHYLL A
lig 115	CLA	G	613	45	CHLOROPHYLL A
lig 116	CLA	G	614	45	CHLOROPHYLL A
lig 117	CHL	N	601	46	CHLOROPHYLL B
lig 118	CLA	N	602	45	CHLOROPHYLL A
lig 119	CLA	N	603	45	CHLOROPHYLL A
lig 120	CLA	N	604	45	CHLOROPHYLL A
lig 121	CHL	N	605	42	CHLOROPHYLL B
lig 122	CHL	N	606	46	CHLOROPHYLL B
lig 123	CHL	N	607	46	CHLOROPHYLL B
lig 124	CHL	N	608	46	CHLOROPHYLL B
lig 125	CHL	N	609	46	CHLOROPHYLL B
lig 126	CLA	N	610	45	CHLOROPHYLL A
lig 127	CLA	N	611	45	CHLOROPHYLL A
lig 128	CLA	N	612	45	CHLOROPHYLL A
lig 129	CLA	N	613	45	CHLOROPHYLL A
lig 130	CLA	N	614	45	CHLOROPHYLL A
lig 131	CHL	Y	601	46	CHLOROPHYLL B
lig 132	CLA	Y	602	45	CHLOROPHYLL A
lig 133	CLA	Y	603	45	CHLOROPHYLL A
lig 134	CLA	Y	604	45	CHLOROPHYLL A
lig 135	CHL	Y	605	42	CHLOROPHYLL B
lig 136	CHL	Y	606	46	CHLOROPHYLL B
lig 137	CHL	Y	607	46	CHLOROPHYLL B
lig 138	CHL	Y	608	46	CHLOROPHYLL B
lig 139	CHL	Y	609	46	CHLOROPHYLL B
lig 140	CLA	Y	610	45	CHLOROPHYLL A
lig 141	CLA	Y	611	45	CHLOROPHYLL A
lig 142	CLA	Y	612	45	CHLOROPHYLL A
lig 143	CLA	Y	613	45	CHLOROPHYLL A
lig 144	CLA	Y	614	45	CHLOROPHYLL A
lig 145	CLA	r	301	45	CHLOROPHYLL A
lig 146	CLA	r	302	45	CHLOROPHYLL A
lig 147	CLA	r	303	45	CHLOROPHYLL A
lig 148	CHL	r	304	46	CHLOROPHYLL B
lig 149	CHL	r	305	46	CHLOROPHYLL B
lig 150	CHL	r	306	46	CHLOROPHYLL B
lig 151	CLA	r	307	45	CHLOROPHYLL A
lig 152	CLA	r	308	45	CHLOROPHYLL A
lig 153	CLA	r	309	45	CHLOROPHYLL A
lig 154	CLA	r	310	45	CHLOROPHYLL A
lig 155	CLA	r	311	45	CHLOROPHYLL A
lig 156	CLA	r	312	45	CHLOROPHYLL A
lig 157	CLA	s	301	45	CHLOROPHYLL A
lig 158	CHL	s	302	46	CHLOROPHYLL B
lig 159	CLA	s	303	45	CHLOROPHYLL A
lig 160	CLA	s	304	45	CHLOROPHYLL A
lig 161	CLA	s	305	45	CHLOROPHYLL A
lig 162	CHL	s	306	46	CHLOROPHYLL B
lig 163	CHL	s	307	46	CHLOROPHYLL B
lig 164	CHL	s	308	46	CHLOROPHYLL B
lig 165	CLA	s	309	45	CHLOROPHYLL A
lig 166	CLA	s	310	45	CHLOROPHYLL A
lig 167	CLA	s	311	45	CHLOROPHYLL A
lig 168	CLA	s	312	45	CHLOROPHYLL A
lig 169	CLA	s	313	45	CHLOROPHYLL A
lig 170	CLA	s	314	45	CHLOROPHYLL A
lig 171	CHL	g	601	46	CHLOROPHYLL B
lig 172	CLA	g	602	45	CHLOROPHYLL A
lig 173	CLA	g	603	45	CHLOROPHYLL A
lig 174	CLA	g	604	45	CHLOROPHYLL A
lig 175	CHL	g	605	42	CHLOROPHYLL B
lig 176	CHL	g	606	46	CHLOROPHYLL B
lig 177	CHL	g	607	46	CHLOROPHYLL B
lig 178	CHL	g	608	46	CHLOROPHYLL B
lig 179	CHL	g	609	46	CHLOROPHYLL B
lig 180	CLA	g	610	45	CHLOROPHYLL A
lig 181	CLA	g	611	45	CHLOROPHYLL A
lig 182	CLA	g	612	45	CHLOROPHYLL A
lig 183	CLA	g	613	45	CHLOROPHYLL A
lig 184	CLA	g	614	45	CHLOROPHYLL A
lig 185	CHL	n	601	46	CHLOROPHYLL B
lig 186	CLA	n	602	45	CHLOROPHYLL A
lig 187	CLA	n	603	45	CHLOROPHYLL A
lig 188	CLA	n	604	45	CHLOROPHYLL A
lig 189	CHL	n	605	42	CHLOROPHYLL B
lig 190	CHL	n	606	46	CHLOROPHYLL B
lig 191	CHL	n	607	46	CHLOROPHYLL B
lig 192	CHL	n	608	46	CHLOROPHYLL B
lig 193	CHL	n	609	46	CHLOROPHYLL B
lig 194	CLA	n	610	45	CHLOROPHYLL A
lig 195	CLA	n	611	45	CHLOROPHYLL A
lig 196	CLA	n	612	45	CHLOROPHYLL A
lig 197	CLA	n	613	45	CHLOROPHYLL A
lig 198	CLA	n	614	45	CHLOROPHYLL A
lig 199	CHL	y	601	46	CHLOROPHYLL B
lig 200	CLA	y	602	45	CHLOROPHYLL A
lig 201	CLA	y	603	45	CHLOROPHYLL A
lig 202	CLA	y	604	45	CHLOROPHYLL A
lig 203	CHL	y	605	42	CHLOROPHYLL B
lig 204	CHL	y	606	46	CHLOROPHYLL B
lig 205	CHL	y	607	46	CHLOROPHYLL B
lig 206	CHL	y	608	46	CHLOROPHYLL B
lig 207	CHL	y	609	46	CHLOROPHYLL B
lig 208	CLA	y	610	45	CHLOROPHYLL A
lig 209	CLA	y	611	45	CHLOROPHYLL A
lig 210	CLA	y	612	45	CHLOROPHYLL A
lig 211	CLA	y	613	45	CHLOROPHYLL A
lig 212	CLA	y	614	45	CHLOROPHYLL A
lig 213	CHL	1	601	46	CHLOROPHYLL B
lig 214	CLA	1	602	45	CHLOROPHYLL A
lig 215	CLA	1	603	45	CHLOROPHYLL A
lig 216	CLA	1	604	45	CHLOROPHYLL A
lig 217	CHL	1	605	42	CHLOROPHYLL B
lig 218	CHL	1	606	46	CHLOROPHYLL B
lig 219	CHL	1	607	46	CHLOROPHYLL B
lig 220	CHL	1	608	46	CHLOROPHYLL B
lig 221	CHL	1	609	46	CHLOROPHYLL B
lig 222	CLA	1	610	45	CHLOROPHYLL A
lig 223	CLA	1	611	45	CHLOROPHYLL A
lig 224	CLA	1	612	45	CHLOROPHYLL A
lig 225	CLA	1	613	45	CHLOROPHYLL A
lig 226	CLA	1	614	45	CHLOROPHYLL A
lig 227	CHL	1	615	46	CHLOROPHYLL B
lig 228	CHL	2	601	46	CHLOROPHYLL B
lig 229	CLA	2	602	45	CHLOROPHYLL A
lig 230	CLA	2	603	45	CHLOROPHYLL A
lig 231	CLA	2	604	45	CHLOROPHYLL A
lig 232	CHL	2	605	42	CHLOROPHYLL B
lig 233	CHL	2	606	46	CHLOROPHYLL B
lig 234	CHL	2	607	46	CHLOROPHYLL B
lig 235	CHL	2	608	46	CHLOROPHYLL B
lig 236	CLA	2	609	45	CHLOROPHYLL A
lig 237	CLA	2	610	45	CHLOROPHYLL A
lig 238	CLA	2	611	45	CHLOROPHYLL A
lig 239	CLA	2	612	45	CHLOROPHYLL A
lig 240	CLA	2	613	45	CHLOROPHYLL A
lig 241	CHL	3	301	46	CHLOROPHYLL B
lig 242	CHL	3	302	46	CHLOROPHYLL B
lig 243	CLA	3	303	45	CHLOROPHYLL A
lig 244	CLA	3	304	45	CHLOROPHYLL A
lig 245	CLA	3	305	45	CHLOROPHYLL A
lig 246	CHL	3	306	42	CHLOROPHYLL B
lig 247	CHL	3	307	46	CHLOROPHYLL B
lig 248	CHL	3	308	46	CHLOROPHYLL B
lig 249	CHL	3	309	46	CHLOROPHYLL B
lig 250	CLA	3	310	45	CHLOROPHYLL A
lig 251	CLA	3	311	45	CHLOROPHYLL A
lig 252	CLA	3	312	45	CHLOROPHYLL A
lig 253	CLA	3	313	45	CHLOROPHYLL A
lig 254	CLA	3	314	45	CHLOROPHYLL A
lig 255	CHL	4	301	46	CHLOROPHYLL B
lig 256	CLA	4	302	45	CHLOROPHYLL A
lig 257	CLA	4	303	45	CHLOROPHYLL A
lig 258	CLA	4	304	45	CHLOROPHYLL A
lig 259	CHL	4	305	46	CHLOROPHYLL B
lig 260	CHL	4	306	46	CHLOROPHYLL B
lig 261	CHL	4	307	46	CHLOROPHYLL B
lig 262	CHL	4	308	46	CHLOROPHYLL B
lig 263	CLA	4	309	45	CHLOROPHYLL A
lig 264	CLA	4	310	45	CHLOROPHYLL A
lig 265	CHL	5	601	46	CHLOROPHYLL B
lig 266	CLA	5	602	45	CHLOROPHYLL A
lig 267	CLA	5	603	45	CHLOROPHYLL A
lig 268	CLA	5	604	45	CHLOROPHYLL A
lig 269	CHL	5	605	42	CHLOROPHYLL B
lig 270	CHL	5	606	46	CHLOROPHYLL B
lig 271	CHL	5	607	46	CHLOROPHYLL B
lig 272	CHL	5	608	46	CHLOROPHYLL B
lig 273	CHL	5	609	46	CHLOROPHYLL B
lig 274	CLA	5	610	45	CHLOROPHYLL A
lig 275	CLA	5	611	45	CHLOROPHYLL A
lig 276	CLA	5	612	45	CHLOROPHYLL A
lig 277	CLA	5	613	45	CHLOROPHYLL A
lig 278	CLA	5	614	45	CHLOROPHYLL A
lig 279	CHL	5	615	46	CHLOROPHYLL B
lig 280	CHL	6	601	46	CHLOROPHYLL B
lig 281	CLA	6	602	45	CHLOROPHYLL A
lig 282	CLA	6	603	45	CHLOROPHYLL A
lig 283	CLA	6	604	45	CHLOROPHYLL A
lig 284	CHL	6	605	42	CHLOROPHYLL B
lig 285	CHL	6	606	46	CHLOROPHYLL B
lig 286	CHL	6	607	46	CHLOROPHYLL B
lig 287	CHL	6	608	46	CHLOROPHYLL B
lig 288	CLA	6	609	45	CHLOROPHYLL A
lig 289	CLA	6	610	45	CHLOROPHYLL A
lig 290	CLA	6	611	45	CHLOROPHYLL A
lig 291	CLA	6	612	45	CHLOROPHYLL A
lig 292	CLA	6	613	45	CHLOROPHYLL A
lig 293	CHL	7	301	46	CHLOROPHYLL B
lig 294	CHL	7	302	46	CHLOROPHYLL B
lig 295	CLA	7	303	45	CHLOROPHYLL A
lig 296	CLA	7	304	45	CHLOROPHYLL A
lig 297	CLA	7	305	45	CHLOROPHYLL A
lig 298	CHL	7	306	42	CHLOROPHYLL B
lig 299	CHL	7	307	46	CHLOROPHYLL B
lig 300	CHL	7	308	46	CHLOROPHYLL B
lig 301	CHL	7	309	46	CHLOROPHYLL B
lig 302	CLA	7	310	45	CHLOROPHYLL A
lig 303	CLA	7	311	45	CHLOROPHYLL A
lig 304	CLA	7	312	45	CHLOROPHYLL A
lig 305	CLA	7	313	45	CHLOROPHYLL A
lig 306	CLA	7	314	45	CHLOROPHYLL A
lig 307	CHL	8	301	46	CHLOROPHYLL B
lig 308	CLA	8	302	45	CHLOROPHYLL A
lig 309	CLA	8	303	45	CHLOROPHYLL A
lig 310	CLA	8	304	45	CHLOROPHYLL A
lig 311	CHL	8	305	46	CHLOROPHYLL B
lig 312	CHL	8	306	46	CHLOROPHYLL B
lig 313	CHL	8	307	46	CHLOROPHYLL B
lig 314	CHL	8	308	46	CHLOROPHYLL B
lig 315	CLA	8	309	45	CHLOROPHYLL A
lig 316	CLA	8	310	45	CHLOROPHYLL A

Analysis of Ligand-Protein Contacts in PDB entry: 5MDX

Analysis of Ligand-Protein Contacts in PDB entry:
5MDX