Analysis of Ligand-Protein Contacts in PDB entry:
5ME0


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 17 ligands in PDB entry 5ME0. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
PSU
A
516 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 2
G7M
A
527 24N7-METHYL-GUANOSINE-5'-MONOPHOSPHATE
lig 3
2MG
A
966 242N-METHYLGUANOSINE-5'-MONOPHOSPHATE
lig 4
5MC
A
967 215-METHYLCYTIDINE-5'-MONOPHOSPHATE
lig 5
2MG
A
1207 242N-METHYLGUANOSINE-5'-MONOPHOSPHATE
lig 6
4OC
A
1402 224N,O2'-METHYLCYTIDINE-5'-MONOPHOSPHATE
lig 7
5MC
A
1407 215-METHYLCYTIDINE-5'-MONOPHOSPHATE
lig 8
UR3
A
1498 213-METHYLURIDINE-5'-MONOPHOSHATE
lig 9
2MG
A
1516 242N-METHYLGUANOSINE-5'-MONOPHOSPHATE
lig 10
MA6
A
1518 246N-DIMETHYLADENOSINE-5'-MONOPHOSHATE
lig 11
MA6
A
1519 246N-DIMETHYLADENOSINE-5'-MONOPHOSHATE
lig 12
D2T
L
89 10(3R)-3-(METHYLSULFANYL)-L-ASPARTIC ACID
lig 13
4SU
X
8 204-THIOURIDINE-5'-MONOPHOSPHATE
lig 14
H2U
X
20 205,6-DIHYDROURIDINE-5'-MONOPHOSPHATE
lig 15
5MU
X
54 215-METHYLURIDINE 5'-MONOPHOSPHATE
lig 16
PSU
X
55 20PSEUDOURIDINE-5'-MONOPHOSPHATE
lig 17
FME
X
101 9N-FORMYLMETHIONINE