Analysis of Ligand-Protein Contacts in PDB entry:
5MGC


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

There are 33 ligands in PDB entry 5MGC. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
NAG
B
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 2
NAG
B
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 3
BMA
B
3 11BETA-D-MANNOPYRANOSE
lig 4
MAN
B
4 11ALPHA-D-MANNOPYRANOSE
lig 5
MAN
B
5 11ALPHA-D-MANNOPYRANOSE
lig 6
MAN
B
6 11ALPHA-D-MANNOPYRANOSE
lig 7
MAN
B
7 11ALPHA-D-MANNOPYRANOSE
lig 8
MAN
B
8 11ALPHA-D-MANNOPYRANOSE
lig 9
NAG
C
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 10
NAG
C
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 11
BMA
C
3 11BETA-D-MANNOPYRANOSE
lig 12
MAN
C
4 11ALPHA-D-MANNOPYRANOSE
lig 13
MAN
C
5 11ALPHA-D-MANNOPYRANOSE
lig 14
MAN
C
6 11ALPHA-D-MANNOPYRANOSE
lig 15
MAN
C
7 11ALPHA-D-MANNOPYRANOSE
lig 16
MAN
C
8 11ALPHA-D-MANNOPYRANOSE
lig 17
MAN
C
9 11ALPHA-D-MANNOPYRANOSE
lig 18
MAN
C
10 11ALPHA-D-MANNOPYRANOSE
lig 19
NAG
D
1 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 20
NAG
D
2 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 21
BMA
D
3 11BETA-D-MANNOPYRANOSE
lig 22
MAN
D
4 11ALPHA-D-MANNOPYRANOSE
lig 23
MAN
D
5 11ALPHA-D-MANNOPYRANOSE
lig 24
MAN
D
6 11ALPHA-D-MANNOPYRANOSE
lig 25
GLC
E
1 12ALPHA-D-GLUCOPYRANOSE
lig 26
GAL
E
2 11BETA-D-GALACTOPYRANOSE
lig 27
GAL
E
3 11BETA-D-GALACTOPYRANOSE
lig 28
NAG
A
1156 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 29
NAG
A
1402 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 30
NAG
A
1478 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 31
NAG
A
1522 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 32
NAG
A
1760 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE
lig 33
NAG
A
1777 142-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE