Analysis of Ligand-Protein Contacts in PDB entry:
5MI3


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

Note, this PDB entry contains modified residue(s) PHOSPHOTHREONINE (TPO) . This residue is treated as heterogroup (ligand) both in the PDB entry and by LPC/CSU analysis.


There are 6 ligands in PDB entry 5MI3. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
TPO
A
383 11PHOSPHOTHREONINE
lig 2
TPO
B
383 11PHOSPHOTHREONINE
lig 3
MG
A
401 1MAGNESIUM ION
lig 4
GDP
A
402 28GUANOSINE-5'-DIPHOSPHATE
lig 5
MG
B
401 1MAGNESIUM ION
lig 6
GDP
B
402 28GUANOSINE-5'-DIPHOSPHATE