Analysis of Ligand-Protein Contacts in PDB entry:
5MRD


Ligand-Protein Contacts (LPC) are derived with the LPC software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).

Note, this PDB entry contains modified residue(s) PHOSPHOSERINE (SEP) . This residue is treated as heterogroup (ligand) both in the PDB entry and by LPC/CSU analysis.


There are 6 ligands in PDB entry 5MRD. Click on ligand of interest for LPC analysis.


HET
ID		Chain
ID		 Residue
N		Number
of atoms 		Ligand name
lig 1
SEP
A
241 10PHOSPHOSERINE
lig 2
S26
A
401 23 PYRROLE-3-CARBOXYLATE
lig 3
DTT
A
402 82,3-DIHYDROXY-1,4-DITHIOBUTANE
lig 4
DMS
A
403 4DIMETHYL SULFOXIDE
lig 5
DMS
A
404 4DIMETHYL SULFOXIDE
lig 6
ATP
A
405 31ADENOSINE-5'-TRIPHOSPHATE